Non-Coding RNA Search

Mixn-0030h06

Sequence:


               
               GGGAAATGCCTGTGATAGTCATGTCCTCTGCCAGGGTACAGAGAAGGCACTTAGAAAATT
CCTGCTCAGGAGCAGTAATGGGGGTGGTGGGGCTCAGTGACCGAGTGGGCAGGGTTCGGA
GCCCCTACCCCACTTCACTAGTAATGCTTCCGCAATTGCCCATCTTAAATCCTGGCGCCT
CTGAGGAGGATCTAAATGGCACGAGGTGGAAATCATTCATCTGGTCCAATGTACCCACTT
CAGACATAGGAAAACTGAGGCCTCAAGAGGTGAAGGGGTATGCCTGCCAATACTATTCTG
GCTGACCCCTGAACTGTTTTCCAAGCATCCCTGAAAGGGAGCCCTTGTGATCAGAAATGG
AAAGTCACCTTGAGGTGATTCCTCAAGGGAGACTAAGTGTGACATGGCACTACATCCTGG
AAAATTTGAAAAATCACCTGTCTTCTCAAATCCTTTAAACCAGCATGCTAAGGTGAAGCT
TGAAATCCAGGTGGCCAAGAGGATGCAGGTGACAAAGTGAAGGTGTGAAGGGCTGTATGA
ACAGAAATAGGGAAGGCAGGTGAAGGCCAGGAGCACCCCCCTCTCCATCCCCACCACCAC
TTCACTTTGCTCCAGGGCCAAGAGCTGGGCCTGAACAGCTCGGTGAGAGAAAGAAAAAGA
AAAAAAAAAAAGAAAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAAATGCCTGTGATAGTCATGTCCTCTGCCAGGGTACAGAGAAGGCACTTAGAAAATT
CCTGCTCAGGAGCAGTAATGGGGGTGGTGGGGCTCAGTGACCGAGTGGGCAGGGTTCGGA
GCCCCTACCCCACTTCACTAGTAATGCTTCCGCAATTGCCCATCTTAAATCCTGGCGCCT
CTGAGGAGGATCTAAATGGCACGAGGTGGAAATCATTCATCTGGTCCAATGTACCCACTT
CAGACATAGGAAAACTGAGGCCTCAAGAGGTGAAGGGGTATGCCTGCCAATACTATTCTG
GCTGACCCCTGAACTGTTTTCCAAGCATCCCTGAAAGGGAGCCCTTGTGATCAGAAATGG
AAAGTCACCTTGAGGTGATTCCTCAAGGGAGACTAAGTGTGACATGGCACTACATCCTGG
AAAATTTGAAAAATCACCTGTCTTCTCAAATCCTTTAAACCAGCATGCTAAGGTGAAGCT
TGAAATCCAGGTGGCCAAGAGGATGCAGGTGACAAAGTGAAGGTGTGAAGGGCTGTATGA
ACAGAAATAGGGAAGGCAGGTGAAGGCCAGGAGCACCCCCCTCTCCATCCCCACCACCAC
TTCACTTTGCTCCAGGGCCAAGAGCTGGGCCTGAACAGCTCGGTGAGAGAAAGAAAAAGA
AAAAAAAAAAAGAAAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               142-297, - strand, RNAz p=0.643782

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               142-297, - strand, RNAz p=0.643782

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-321, gnl|bosTau2|chr17 (41650725-41651028)
               

               
               1-321, gnl|Hg17|chr22 (28506881-28507723)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-321, gnl|bosTau2|chr17 (41650725-41651028)
               

               
               1-321, gnl|Hg17|chr22 (28506881-28507723)

	1-321, gnl\|bosTau2\|chr17 (41650725-41651028)
	1-321, gnl\|Hg17\|chr22 (28506881-28507723)