Mixn-0030l08
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCAGGCACCGCCTTCCTGTGCCCCGAGTTCCGGGGGTTTCTGAAGGGCATCGAGTACGCT GATTCCTTCACGTTTAATCCTTCTAAGTGGATGATGGTGCACTTTGACTGTACTGGGTTC TGGGTCAAGGACAAGTACAAGCTACAGCAGACCTTCAGCGTGAACCCTGTCTACCTCAGG CATGCCAACTCGGGCGCGGCCACCGACTTCATGCACTGGCAGATACCTCTGAGCCGGCGG TTTCGCTCTATTAAACTCTGGTTTGTGATTCGGTCCTTTGGGGTGAAGAATCTTCAAGCG CACGTTAGACATGGTATTGAAATGGCTAAATATTTTGAATCTTTGGTCAGAAATGACCCT TTCTTTGAAATTCCTGCCAAGAGGCACCTCGGCCTGGTGGTTTTTCGTCTAAAGGGTCCT AATTGTCTCACCGAAAGTGTGCTAAAGGAAATAGCTAAAGCTGGCCATCTCTTCCTCATC CCAGCCACGATCCAGGACAAGTTGATCATCCGTTTCACTGTGACATCCCAGTTCACCACC AGGGATGACATCCTGAGAGACTGGAACCTCATTCATGATGCCGCCACTCTCATCCTGAGT CAGCATTGTACTTCCCAGCCTAGCCCTCGGCTGGGGAACCTCATCCCCCAAACCCAGGGC CCCAGAGCCTTGGCCAAGGAAATGTCCTTTCCATCTGTCAACGGGGCAGAAGATGACCCA GCCCAGGCCAGGAAGATCATCANGCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCAGGCACCGCCTTCCTGTGCCCCGAGTTCCGGGGGTTTCTGAAGGGCATCGAGTACGCT GATTCCTTCACGTTTAATCCTTCTAAGTGGATGATGGTGCACTTTGACTGTACTGGGTTC TGGGTCAAGGACAAGTACAAGCTACAGCAGACCTTCAGCGTGAACCCTGTCTACCTCAGG CATGCCAACTCGGGCGCGGCCACCGACTTCATGCACTGGCAGATACCTCTGAGCCGGCGG TTTCGCTCTATTAAACTCTGGTTTGTGATTCGGTCCTTTGGGGTGAAGAATCTTCAAGCG CACGTTAGACATGGTATTGAAATGGCTAAATATTTTGAATCTTTGGTCAGAAATGACCCT TTCTTTGAAATTCCTGCCAAGAGGCACCTCGGCCTGGTGGTTTTTCGTCTAAAGGGTCCT AATTGTCTCACCGAAAGTGTGCTAAAGGAAATAGCTAAAGCTGGCCATCTCTTCCTCATC CCAGCCACGATCCAGGACAAGTTGATCATCCGTTTCACTGTGACATCCCAGTTCACCACC AGGGATGACATCCTGAGAGACTGGAACCTCATTCATGATGCCGCCACTCTCATCCTGAGT CAGCATTGTACTTCCCAGCCTAGCCCTCGGCTGGGGAACCTCATCCCCCAAACCCAGGGC CCCAGAGCCTTGGCCAAGGAAATGTCCTTTCCATCTGTCAACGGGGCAGAAGATGACCCA GCCCAGGCCAGGAAGATCATCANGCAG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 472-631, - strand, RNAz p=0.666728 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 472-631, - strand, RNAz p=0.666728 |
| Aligned organism(s): 25 entry(ies) | More info |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
| 1-123, gnl|bosTau2|chr10 (41932346-41932468) | |
| 1-123, gnl|Hg17|chr15 (48332222-48332100) | |
| 1-123, gnl|Mm7|chr2 (126342761-126342639) | |
| 208-313, gnl|bosTau2|chr10 (41936619-41936724) | |
| 208-313, gnl|canFam2|chr30 (19197906-19198053) | |
| 208-313, gnl|danRer3|chr5 (42759205-42759320) | |
| 208-313, gnl|dasNov1|scaffold_172668 (3535-3380) | |
| 208-313, gnl|echTel1|scaffold_302626 (532-686) | |
| 208-313, gnl|fr1|chrUn (240445430-240445283) | |
| 208-313, gnl|galGal2|chr10 (11477534-11477380) | |
| 208-313, gnl|hg17|chr15 (48327721-48327874) | |
| 208-313, gnl|Hg17|chr15 (48327838-48327733) | |
| 208-313, gnl|loxAfr1|scaffold_11087 (28908-29062) | |
| 208-313, gnl|mm7|chr2 (126338710-126338863) | |
| 208-313, gnl|Mm7|chr2 (126338828-126338723) | |
| 208-313, gnl|monDom2|scaffold_12 (18169656-18169501) | |
| 208-313, gnl|oryCun1|scaffold_182207 (92676-92522) | |
| 208-313, gnl|panTro1|chr16 (48340558-48340711) | |
| 208-313, gnl|rheMac2|chr7 (28564368-28564521) | |
| 208-313, gnl|rn3|chr3 (114028508-114028662) | |
| 208-313, gnl|tetNig1|chr5 (9748930-9749036) | |
| 208-313, gnl|xenTro1|scaffold_613 (608582-608700) | |
| 394-747, gnl|bosTau2|chr10 (41940350-41940704) | |
| 394-747, gnl|Hg17|chr15 (48322518-48322163) | |
| 394-747, gnl|Mm7|chr2 (126335561-126335219) |
| Aligned organism(s): 25 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-123, gnl|bosTau2|chr10 (41932346-41932468) | |
| 1-123, gnl|Hg17|chr15 (48332222-48332100) | |
| 1-123, gnl|Mm7|chr2 (126342761-126342639) | |
| 208-313, gnl|bosTau2|chr10 (41936619-41936724) | |
| 208-313, gnl|canFam2|chr30 (19197906-19198053) | |
| 208-313, gnl|danRer3|chr5 (42759205-42759320) | |
| 208-313, gnl|dasNov1|scaffold_172668 (3535-3380) | |
| 208-313, gnl|echTel1|scaffold_302626 (532-686) | |
| 208-313, gnl|fr1|chrUn (240445430-240445283) | |
| 208-313, gnl|galGal2|chr10 (11477534-11477380) | |
| 208-313, gnl|hg17|chr15 (48327721-48327874) | |
| 208-313, gnl|Hg17|chr15 (48327838-48327733) | |
| 208-313, gnl|loxAfr1|scaffold_11087 (28908-29062) | |
| 208-313, gnl|mm7|chr2 (126338710-126338863) | |
| 208-313, gnl|Mm7|chr2 (126338828-126338723) | |
| 208-313, gnl|monDom2|scaffold_12 (18169656-18169501) | |
| 208-313, gnl|oryCun1|scaffold_182207 (92676-92522) | |
| 208-313, gnl|panTro1|chr16 (48340558-48340711) | |
| 208-313, gnl|rheMac2|chr7 (28564368-28564521) | |
| 208-313, gnl|rn3|chr3 (114028508-114028662) | |
| 208-313, gnl|tetNig1|chr5 (9748930-9749036) | |
| 208-313, gnl|xenTro1|scaffold_613 (608582-608700) | |
| 394-747, gnl|bosTau2|chr10 (41940350-41940704) | |
| 394-747, gnl|Hg17|chr15 (48322518-48322163) | |
| 394-747, gnl|Mm7|chr2 (126335561-126335219) |