Non-Coding RNA Search

Mixn-0030l22

Sequence:


               
               GCTCAAGGTCATCCAGCTGGTGTGAGCCAAGATTTGGACTCAAGTCTCAGCCTGTGCTCT
TAACCTGTACATTCCCCTAAATGTGAAGTTTGCATTCTAGTTCAAGATGCAGCATTTGTA
TTCGTTCTCATTTACAAAATACTGCGTTAAAGCATGCTCAGTGCACATACTCGCTCTCGG
AGGTCTAAGTTCCTCCCGGTGCACAGACACAAGGTAGGACAGCCGACCTTCAGAGAACAA
CCAGAGAAGGAGTGTGTCGGGGGCTAGTTCTGCAGGGGATGTGGGGCTTGCAGAAAAGAG
GTCTTTGGGAAGCTGACAGCTCTGGTTCTGTGAAGAAAGGGAGTTTCTGTCCCCGTGGCC
CTGCTGGCCTGCCCTCCCTGGCGGCCACACCTGTTCTGTCCTTCTCTCTATACCCAGCCA
GACGTCTCTCCCAGAGTGACAGCAGCAACTGGGGACATCTGCAGAATCTCCCTCTCAGGC
TTGACAAAGGCACTCAGAACCTGGCCCAGGCCTGTGAGAGAGGGAGGTGGAGGCGGGGTA
GGTGGCGGGGGGGTGGGTGGGCACTGGATGGGGACAGCTGTGGGCTGCTGTGGCAGGCGT
GGCCCTGCCCCGGAACAGGTGAGGTAAATGTGAACTGGGGCGGAAGCCCCCTGGGCTTTT
AAGGGTGAAAGAGAGACAGTGTGGGACTTAACGAGAAGACAGGGTGGGACCTCTCANGAC
ACGGTGGCTTAACTTCATGGCTGGGGNTATAAGCTCCCTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCTCAAGGTCATCCAGCTGGTGTGAGCCAAGATTTGGACTCAAGTCTCAGCCTGTGCTCT
TAACCTGTACATTCCCCTAAATGTGAAGTTTGCATTCTAGTTCAAGATGCAGCATTTGTA
TTCGTTCTCATTTACAAAATACTGCGTTAAAGCATGCTCAGTGCACATACTCGCTCTCGG
AGGTCTAAGTTCCTCCCGGTGCACAGACACAAGGTAGGACAGCCGACCTTCAGAGAACAA
CCAGAGAAGGAGTGTGTCGGGGGCTAGTTCTGCAGGGGATGTGGGGCTTGCAGAAAAGAG
GTCTTTGGGAAGCTGACAGCTCTGGTTCTGTGAAGAAAGGGAGTTTCTGTCCCCGTGGCC
CTGCTGGCCTGCCCTCCCTGGCGGCCACACCTGTTCTGTCCTTCTCTCTATACCCAGCCA
GACGTCTCTCCCAGAGTGACAGCAGCAACTGGGGACATCTGCAGAATCTCCCTCTCAGGC
TTGACAAAGGCACTCAGAACCTGGCCCAGGCCTGTGAGAGAGGGAGGTGGAGGCGGGGTA
GGTGGCGGGGGGGTGGGTGGGCACTGGATGGGGACAGCTGTGGGCTGCTGTGGCAGGCGT
GGCCCTGCCCCGGAACAGGTGAGGTAAATGTGAACTGGGGCGGAAGCCCCCTGGGCTTTT
AAGGGTGAAAGAGAGACAGTGTGGGACTTAACGAGAAGACAGGGTGGGACCTCTCANGAC
ACGGTGGCTTAACTTCATGGCTGGGGNTATAAGCTCCCTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               556-669, + strand, RNAz p=0.805341

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               556-669, + strand, RNAz p=0.805341

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-689, gnl|bosTau2|chr10 (60329174-60328500)
               

               
               1-689, gnl|Hg17|chr14 (73301825-73301143)
               

               
               1-689, gnl|Mm7|chr12 (82194627-82194016)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-689, gnl|bosTau2|chr10 (60329174-60328500)
               

               
               1-689, gnl|Hg17|chr14 (73301825-73301143)
               

               
               1-689, gnl|Mm7|chr12 (82194627-82194016)

	1-689, gnl\|bosTau2\|chr10 (60329174-60328500)
	1-689, gnl\|Hg17\|chr14 (73301825-73301143)
	1-689, gnl\|Mm7\|chr12 (82194627-82194016)