Non-Coding RNA Search

Mixn-0030m04

Sequence:


               
               CGTCTGTGGTTCCTCCTCCTCTCCTATGGCTCTGAGCATCCCCCCAGGGCTCAGGCTGAG
AGATTCTCTTCTGTCTATACTCCTAGAGCTGTGGTCTCCTGGCTTCAGACAACATCGAAA
TGCCTACAAATTCCAAAATCGTATCTTCAGGCTCTACCTCTTCTGGAGACTTCATGTTCA
CATAGCCAACAGCCTGATCAGCACTTCCATTAGGACGTCTGATGGGAGATCAAAACCTTA
CCATGGGGATATCTTTCCCAGTCTACTTGACCTCTAGGATTCCCATCTCATTCATGGTGA
CTCCAAACTTCCAGCAGCTGAAGCCAAAAATTCTAGGGTCATTCTTGATTCTTTTCTTTC
TCTTACTCAATATCTAATTCATCAGCAAACCCTTCAGAATATTTCCAGAACTCAACCACT
TATCACCTTCACTAACACCATGGCTTAAGCCACTATACCTTTTACTTGGATGGATACAAT
GTCCTCCTACATGGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGTCTGTGGTTCCTCCTCCTCTCCTATGGCTCTGAGCATCCCCCCAGGGCTCAGGCTGAG
AGATTCTCTTCTGTCTATACTCCTAGAGCTGTGGTCTCCTGGCTTCAGACAACATCGAAA
TGCCTACAAATTCCAAAATCGTATCTTCAGGCTCTACCTCTTCTGGAGACTTCATGTTCA
CATAGCCAACAGCCTGATCAGCACTTCCATTAGGACGTCTGATGGGAGATCAAAACCTTA
CCATGGGGATATCTTTCCCAGTCTACTTGACCTCTAGGATTCCCATCTCATTCATGGTGA
CTCCAAACTTCCAGCAGCTGAAGCCAAAAATTCTAGGGTCATTCTTGATTCTTTTCTTTC
TCTTACTCAATATCTAATTCATCAGCAAACCCTTCAGAATATTTCCAGAACTCAACCACT
TATCACCTTCACTAACACCATGGCTTAAGCCACTATACCTTTTACTTGGATGGATACAAT
GTCCTCCTACATGGTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               381-496, - strand, RNAz p=0.900287

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               381-496, - strand, RNAz p=0.900287

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               70-496, gnl|bosTau2|chr5 (56242961-56242538)
               

               
               70-496, gnl|canFam2|chr27 (35914523-35914207)
               

               
               70-496, gnl|echTel1|scaffold_313681 (92493-92175)
               

               
               70-496, gnl|hg17|chr12 (13588607-13588943)
               

               
               70-496, gnl|Hg17|chr12 (13588606-13589053)
               

               
               70-496, gnl|rheMac2|chr11 (13912135-13912471)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               70-496, gnl|bosTau2|chr5 (56242961-56242538)
               

               
               70-496, gnl|canFam2|chr27 (35914523-35914207)
               

               
               70-496, gnl|echTel1|scaffold_313681 (92493-92175)
               

               
               70-496, gnl|hg17|chr12 (13588607-13588943)
               

               
               70-496, gnl|Hg17|chr12 (13588606-13589053)
               

               
               70-496, gnl|rheMac2|chr11 (13912135-13912471)

	70-496, gnl\|bosTau2\|chr5 (56242961-56242538)
	70-496, gnl\|canFam2\|chr27 (35914523-35914207)
	70-496, gnl\|echTel1\|scaffold_313681 (92493-92175)
	70-496, gnl\|hg17\|chr12 (13588607-13588943)
	70-496, gnl\|Hg17\|chr12 (13588606-13589053)
	70-496, gnl\|rheMac2\|chr11 (13912135-13912471)