Mixn-0031e09
|
GGAGCGAGGATTTTGACATCTACACGTTGTACTGCATGAACTACCCAAGCTCCCTGGCCC
TACTCCGGGAGCTGTCGCTGTCTCCGCCAGCGGCTGTGTGGCTGCAGGAGCGCCAGGCCC
AGCTCCAGCACTCCCTGCCCCTGCAGAGCTTCCTGCTCAAACCCGTTCAGCGCATCCTCA
AGTACCATCTGCTGCTGCAGGAGCTTGGCAAGCACTGGGCGGAGGGCCCAGATGCCGGGG
GCCGGGAGATGGTGGAGGAGGCTATCGTGTCCATGACAGCGGTCGCCTGGTACATCAATG
ACATGAAACGCAAGCAGGAGCACGCTGCGCGCCTCCAGGAGGTGCAGCGGCGGCTGGGTG
GCTGGACCGGCCCAGAGCTCAGTGCCTTTGGGGAGCTGGTGCTGGAGGGTGCATTCCGAG
GTGGTGGAGGGGGCGGCCCCCGACTTCGAGGGGGTGAACGGCTGCTTTTTCTATTCTCAC
GGATGCTGCTTGTGGCCAAGCGCCGGGGGCCGGAATACACCTACAAGGGCCACATCTTTT
GTTGCAACCTGAGCGTGAGTGAGAGCCCTCGAGACCCCCTGGGGTTCAAGGTGTCCGATC
TGACCATCCCCAAGCACCGGCACCTGCTCCAGGCCAAAAACCAAGAAGAAAAGAGGCTGT
GGATTCACTGTCTCCAGCGCCTCTTCTTCGAGAACCACCCTGCCTCCATCCCTGGCAAGG
CAAAGCAAGTTCTTCTTGGAAACAGCTTGCACTGTGCTCCCAAAAGTAAGCCTATCCCAG
AGCCCCTGACACCCCCACTTGGGTCTCCCCGACCTCGAGATGCTAGAAGTTTCCCCCTGG
ACGAAGGACACAGCTC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGAGCGAGGATTTTGACATCTACACGTTGTACTGCATGAACTACCCAAGCTCCCTGGCCC
TACTCCGGGAGCTGTCGCTGTCTCCGCCAGCGGCTGTGTGGCTGCAGGAGCGCCAGGCCC
AGCTCCAGCACTCCCTGCCCCTGCAGAGCTTCCTGCTCAAACCCGTTCAGCGCATCCTCA
AGTACCATCTGCTGCTGCAGGAGCTTGGCAAGCACTGGGCGGAGGGCCCAGATGCCGGGG
GCCGGGAGATGGTGGAGGAGGCTATCGTGTCCATGACAGCGGTCGCCTGGTACATCAATG
ACATGAAACGCAAGCAGGAGCACGCTGCGCGCCTCCAGGAGGTGCAGCGGCGGCTGGGTG
GCTGGACCGGCCCAGAGCTCAGTGCCTTTGGGGAGCTGGTGCTGGAGGGTGCATTCCGAG
GTGGTGGAGGGGGCGGCCCCCGACTTCGAGGGGGTGAACGGCTGCTTTTTCTATTCTCAC
GGATGCTGCTTGTGGCCAAGCGCCGGGGGCCGGAATACACCTACAAGGGCCACATCTTTT
GTTGCAACCTGAGCGTGAGTGAGAGCCCTCGAGACCCCCTGGGGTTCAAGGTGTCCGATC
TGACCATCCCCAAGCACCGGCACCTGCTCCAGGCCAAAAACCAAGAAGAAAAGAGGCTGT
GGATTCACTGTCTCCAGCGCCTCTTCTTCGAGAACCACCCTGCCTCCATCCCTGGCAAGG
CAAAGCAAGTTCTTCTTGGAAACAGCTTGCACTGTGCTCCCAAAAGTAAGCCTATCCCAG
AGCCCCTGACACCCCCACTTGGGTCTCCCCGACCTCGAGATGCTAGAAGTTTCCCCCTGG
ACGAAGGACACAGCTC
|
|
gi|10438857|dbj|BAB15364.1| |
Protein identifier
|
gi|10438857|dbj|BAB15364.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
44-201, gnl|bosTau2|chr18 (43742889-43742732) |
|
44-201, gnl|Hg17|chr19 (44599324-44599481) |
|
44-201, gnl|Mm7|chr7 (25302346-25302188) |
| |
|
336-539, gnl|bosTau2|chr18 (43742102-43741899) |
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336-539, gnl|Hg17|chr19 (44600382-44600585) |
|
336-539, gnl|Mm7|chr7 (25301736-25301533) |
| |
|
604-726, gnl|bosTau2|chr18 (43741041-43740921) |
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604-726, gnl|Hg17|chr19 (44601377-44601490) |
|
604-726, gnl|Mm7|chr7 (25299284-25299173) |
| |
|
754-853, gnl|bosTau2|chr18 (43740211-43740110) |
|
754-853, gnl|canFam2|chr1 (116714137-116713801) |
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754-853, gnl|echTel1|scaffold_132435 (772-404) |
|
754-853, gnl|hg17|chr19 (44603117-44603427) |
|
754-853, gnl|Hg17|chr19 (44603231-44603332) |
|
754-853, gnl|loxAfr1|scaffold_32428 (23443-23081) |
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754-853, gnl|mm7|chr7 (25298839-25298534) |
|
754-853, gnl|Mm7|chr7 (25298724-25298623) |
|
754-853, gnl|monDom2|scaffold_139 (1053962-1054325) |
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754-853, gnl|panTro1|chr20 (41548447-41548757) |
|
754-853, gnl|rheMac2|chr19 (45765290-45765600) |
|
754-853, gnl|rn3|chr1 (83552715-83552408) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
44-201, gnl|bosTau2|chr18 (43742889-43742732) |
|
44-201, gnl|Hg17|chr19 (44599324-44599481) |
|
44-201, gnl|Mm7|chr7 (25302346-25302188) |
| |
|
336-539, gnl|bosTau2|chr18 (43742102-43741899) |
|
336-539, gnl|Hg17|chr19 (44600382-44600585) |
|
336-539, gnl|Mm7|chr7 (25301736-25301533) |
| |
|
604-726, gnl|bosTau2|chr18 (43741041-43740921) |
|
604-726, gnl|Hg17|chr19 (44601377-44601490) |
|
604-726, gnl|Mm7|chr7 (25299284-25299173) |
| |
|
754-853, gnl|bosTau2|chr18 (43740211-43740110) |
|
754-853, gnl|canFam2|chr1 (116714137-116713801) |
|
754-853, gnl|echTel1|scaffold_132435 (772-404) |
|
754-853, gnl|hg17|chr19 (44603117-44603427) |
|
754-853, gnl|Hg17|chr19 (44603231-44603332) |
|
754-853, gnl|loxAfr1|scaffold_32428 (23443-23081) |
|
754-853, gnl|mm7|chr7 (25298839-25298534) |
|
754-853, gnl|Mm7|chr7 (25298724-25298623) |
|
754-853, gnl|monDom2|scaffold_139 (1053962-1054325) |
|
754-853, gnl|panTro1|chr20 (41548447-41548757) |
|
754-853, gnl|rheMac2|chr19 (45765290-45765600) |
|
754-853, gnl|rn3|chr1 (83552715-83552408) |
