Non-Coding RNA Search

Mixn-0032f20

Sequence:


               
               CCTGTCCTTCTTGGTTGCCATTATTACCAGGAAATATTGCCATTTCCACAGTGGACCATG
GGAAGGAAGAGTTGTGTAGATTAAATCTTGTCTGTGAAGCAGATGACAATCACCAACAGA
ATCTTGGCCACCATAACGAGAGATACAGTTCTGTCCATGGCAGTCCCAAAACCACGAAAA
GTGTGGTTATTTTAGAACCCTTAGAAGAAAATCCCGAAGTTTCACATTTCACGTCAAGTT
TGTCTGGTCCAGAATCCAGAACAGAATCTTCAGACAAGTGTGATTTAGAAGGCGACAGCT
TGCCAAAGGGATCTGCTGAAAAGACAGACAAGTCCTGTTTTAATGGGGATGATCAAAGCA
AGAATGTGGCTTCTAGAGAAGAAAATGAACAGCCTTTGAGCCCCAGGAGTGAAAGAGTGG
AACTCTTTCTTGTTAATGCCAAGCAACTGGAAGAGGATGCTAGCAGTCACTGTTTAGGAA
AAAAAGAGACTGTTAACTTCCCCAAAGGCAATATCCATGATAACTGCTGCCCTTTAGGCA
GTGTCCATAAAGACTCCTCTAATTTCTTTAATGCCTAATTCTTTCACTGAGGCCACAGAA
GTAATGTCTAAAAAAAATGATCTTAAAATGACTTTAGACA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTGTCCTTCTTGGTTGCCATTATTACCAGGAAATATTGCCATTTCCACAGTGGACCATG
GGAAGGAAGAGTTGTGTAGATTAAATCTTGTCTGTGAAGCAGATGACAATCACCAACAGA
ATCTTGGCCACCATAACGAGAGATACAGTTCTGTCCATGGCAGTCCCAAAACCACGAAAA
GTGTGGTTATTTTAGAACCCTTAGAAGAAAATCCCGAAGTTTCACATTTCACGTCAAGTT
TGTCTGGTCCAGAATCCAGAACAGAATCTTCAGACAAGTGTGATTTAGAAGGCGACAGCT
TGCCAAAGGGATCTGCTGAAAAGACAGACAAGTCCTGTTTTAATGGGGATGATCAAAGCA
AGAATGTGGCTTCTAGAGAAGAAAATGAACAGCCTTTGAGCCCCAGGAGTGAAAGAGTGG
AACTCTTTCTTGTTAATGCCAAGCAACTGGAAGAGGATGCTAGCAGTCACTGTTTAGGAA
AAAAAGAGACTGTTAACTTCCCCAAAGGCAATATCCATGATAACTGCTGCCCTTTAGGCA
GTGTCCATAAAGACTCCTCTAATTTCTTTAATGCCTAATTCTTTCACTGAGGCCACAGAA
GTAATGTCTAAAAAAAATGATCTTAAAATGACTTTAGACA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               362-518, - strand, RNAz p=0.998529

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               362-518, - strand, RNAz p=0.998529

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               5-638, gnl|bosTau2|chr17 (43257945-43257316)
               

               
               5-638, gnl|Hg17|chr22 (30437545-30436934)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-638, gnl|bosTau2|chr17 (43257945-43257316)
               

               
               5-638, gnl|Hg17|chr22 (30437545-30436934)

	5-638, gnl\|bosTau2\|chr17 (43257945-43257316)
	5-638, gnl\|Hg17\|chr22 (30437545-30436934)