Non-Coding RNA Search

Mixn-0032k14

Sequence:


               
               GGGAGGAAGGGGCGAGAGAAGCAGGAGGGCTGGGGCCCCTTAGGGGGCGTGGACTGTAGA
GGGCCGCCCCTAAGGGGCGGGATGGAGCCTTCCAGGAGAGGGGCGAGTCGTTCAAGGGCC
GGGATCTGTGGGGTCAGCCCCGCCCCGCCCCGGCCCGCCCGGCCCGGCTCTGCCTTCTCG
CCGCAGGATCTACTGCGGATGCTTCTACTTTTTCCCCTGGCTGCTCATGTGGCGGAGGGA
GCCAAGGGGGGCAGATGACATACCGCGGCCTCGCTCGGGGCATGCTCGAGGCTCAGTCCG
GGAGAAGGGATCGGGTGCAAGTGCCAAGAACCCCCGCCTCACCTCATCCCAGTGTTGGGT
AGCGCCACAGCTCGGCGCACCCTCGCGAGCAGAAGCTGGAGACTCTGCGGAGCTGGTGAG
CTGTCTGTCAAGCGGCCTGAGCTCTGCTCGCCAACGCTCCAATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGGAGGAAGGGGCGAGAGAAGCAGGAGGGCTGGGGCCCCTTAGGGGGCGTGGACTGTAGA
GGGCCGCCCCTAAGGGGCGGGATGGAGCCTTCCAGGAGAGGGGCGAGTCGTTCAAGGGCC
GGGATCTGTGGGGTCAGCCCCGCCCCGCCCCGGCCCGCCCGGCCCGGCTCTGCCTTCTCG
CCGCAGGATCTACTGCGGATGCTTCTACTTTTTCCCCTGGCTGCTCATGTGGCGGAGGGA
GCCAAGGGGGGCAGATGACATACCGCGGCCTCGCTCGGGGCATGCTCGAGGCTCAGTCCG
GGAGAAGGGATCGGGTGCAAGTGCCAAGAACCCCCGCCTCACCTCATCCCAGTGTTGGGT
AGCGCCACAGCTCGGCGCACCCTCGCGAGCAGAAGCTGGAGACTCTGCGGAGCTGGTGAG
CTGTCTGTCAAGCGGCCTGAGCTCTGCTCGCCAACGCTCCAATC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               9-208, + strand, RNAz p=0.983488

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               9-208, + strand, RNAz p=0.983488

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               23-269, + strand, RNAmicro p=0.990198

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               23-269, + strand, RNAmicro p=0.990198

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               9-460, gnl|bosTau2|chr8 (41438916-41438476)
               

               
               9-460, gnl|Hg17|chr9 (34655540-34655097)
               

               
               9-460, gnl|Mm7|chr4 (41911974-41911565)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               9-460, gnl|bosTau2|chr8 (41438916-41438476)
               

               
               9-460, gnl|Hg17|chr9 (34655540-34655097)
               

               
               9-460, gnl|Mm7|chr4 (41911974-41911565)

	9-460, gnl\|bosTau2\|chr8 (41438916-41438476)
	9-460, gnl\|Hg17\|chr9 (34655540-34655097)
	9-460, gnl\|Mm7\|chr4 (41911974-41911565)