Mixn-0032p18
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CGAACCAAGCCTGCTGTCCCCGGAGGGGCTGAGGATCCTGTTGGTGAAAGGAGATGTGCA GAATGCTGCGACCGATGTGGTTGTCAACTCCATTCCCTTGGATCTTGAGCTCAACAGAGG GCCCCTCTCCAAGGCCCTCTTGGAAAAAGCTGGACCAAAACTCCAGGAGGAACTGAAGAT AGTCGGACAAGGGGTGGCTGTTGAAATGGGAACAGTTCTCCAAACCAGTGGTTGCAATCT GCCTTGCCAATGCGTGCTTCATGTGGTGGCTCCAGACTGGGGAAATGGCAATGCATCATC ACACAAGATCATGGAAAACATAATCAGAGACTGTTTGGAGATCACGGAGAGTCTGTCCTT AAAATCAATTGCATTTCCAGCAATAGGAACAGGAAATTTGGGGTTTCCTAAAAACATTTT TGCTGAATTAATCACTTCACAAGTGTTCAAATTCAGTAGCAAGAATCAACCGAAAAGTTT ACAAGAGGCTTTGCTTTCTGTTGTACCCAAGTGACCATGGAAACTAATTCAGGCATTTTT CAGATGAATTTGCCCAGAAGGGCTAATGTGAAATCTTCATCAGTGGCAAAATTTCCCAAG TGCTGGGAGATACACAAGGTTTTCCCCTATT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CGAACCAAGCCTGCTGTCCCCGGAGGGGCTGAGGATCCTGTTGGTGAAAGGAGATGTGCA GAATGCTGCGACCGATGTGGTTGTCAACTCCATTCCCTTGGATCTTGAGCTCAACAGAGG GCCCCTCTCCAAGGCCCTCTTGGAAAAAGCTGGACCAAAACTCCAGGAGGAACTGAAGAT AGTCGGACAAGGGGTGGCTGTTGAAATGGGAACAGTTCTCCAAACCAGTGGTTGCAATCT GCCTTGCCAATGCGTGCTTCATGTGGTGGCTCCAGACTGGGGAAATGGCAATGCATCATC ACACAAGATCATGGAAAACATAATCAGAGACTGTTTGGAGATCACGGAGAGTCTGTCCTT AAAATCAATTGCATTTCCAGCAATAGGAACAGGAAATTTGGGGTTTCCTAAAAACATTTT TGCTGAATTAATCACTTCACAAGTGTTCAAATTCAGTAGCAAGAATCAACCGAAAAGTTT ACAAGAGGCTTTGCTTTCTGTTGTACCCAAGTGACCATGGAAACTAATTCAGGCATTTTT CAGATGAATTTGCCCAGAAGGGCTAATGTGAAATCTTCATCAGTGGCAAAATTTCCCAAG TGCTGGGAGATACACAAGGTTTTCCCCTATT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 70-224, - strand, RNAz p=0.769035 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 70-224, - strand, RNAz p=0.769035 |
| Aligned organism(s): 29 entry(ies) | More info |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
| 70-307, gnl|bosTau2|chr1 (39262887-39262650) | |
| 70-307, gnl|canFam2|chr33 (28824769-28824942) | |
| 70-307, gnl|canFam2|chr33 (28753963-28754214) | |
| 70-307, gnl|danRer3|chr16 (20439316-20439153) | |
| 70-307, gnl|echTel1|scaffold_302218 (6224-6051) | |
| 70-307, gnl|echTel1|scaffold_302218 (6306-6057) | |
| 70-307, gnl|fr1|chrUn (183435210-183435038) | |
| 70-307, gnl|galGal2|chr7 (28936577-28936404) | |
| 70-307, gnl|galGal2|chr7 (28936659-28936410) | |
| 70-307, gnl|hg17|chr3 (123905324-123905497) | |
| 70-307, gnl|hg17|chr3 (123811996-123812243) | |
| 70-307, gnl|Hg17|chr3 (123905278-123905515) | |
| 70-307, gnl|loxAfr1|scaffold_1888 (20213-20386) | |
| 70-307, gnl|loxAfr1|scaffold_1888 (20147-20380) | |
| 70-307, gnl|mm7|chr16 (35527928-35527752) | |
| 70-307, gnl|mm7|chr16 (35527983-35527761) | |
| 70-307, gnl|Mm7|chr16 (35527972-35527732) | |
| 70-307, gnl|monDom2|scaffold_24 (20280093-20280266) | |
| 70-307, gnl|monDom2|scaffold_24 (20280014-20280260) | |
| 70-307, gnl|oryCun1|scaffold_176026 (49925-50147) | |
| 70-307, gnl|oryCun1|scaffold_56150 (4-178) | |
| 70-307, gnl|panTro1|chr2 (125596820-125596993) | |
| 70-307, gnl|panTro1|chr2 (125501552-125501799) | |
| 70-307, gnl|rheMac2|chr2 (42698749-42698922) | |
| 70-307, gnl|rheMac2|chr2 (42601511-42601759) | |
| 70-307, gnl|rn3|chr11 (66811440-66811616) | |
| 70-307, gnl|rn3|chr11 (66811373-66811607) | |
| 70-307, gnl|tetNig1|chr2 (16117859-16118096) | |
| 70-307, gnl|xenTro1|scaffold_1014 (186489-186324) |
| Aligned organism(s): 29 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 70-307, gnl|bosTau2|chr1 (39262887-39262650) | |
| 70-307, gnl|canFam2|chr33 (28824769-28824942) | |
| 70-307, gnl|canFam2|chr33 (28753963-28754214) | |
| 70-307, gnl|danRer3|chr16 (20439316-20439153) | |
| 70-307, gnl|echTel1|scaffold_302218 (6224-6051) | |
| 70-307, gnl|echTel1|scaffold_302218 (6306-6057) | |
| 70-307, gnl|fr1|chrUn (183435210-183435038) | |
| 70-307, gnl|galGal2|chr7 (28936577-28936404) | |
| 70-307, gnl|galGal2|chr7 (28936659-28936410) | |
| 70-307, gnl|hg17|chr3 (123905324-123905497) | |
| 70-307, gnl|hg17|chr3 (123811996-123812243) | |
| 70-307, gnl|Hg17|chr3 (123905278-123905515) | |
| 70-307, gnl|loxAfr1|scaffold_1888 (20213-20386) | |
| 70-307, gnl|loxAfr1|scaffold_1888 (20147-20380) | |
| 70-307, gnl|mm7|chr16 (35527928-35527752) | |
| 70-307, gnl|mm7|chr16 (35527983-35527761) | |
| 70-307, gnl|Mm7|chr16 (35527972-35527732) | |
| 70-307, gnl|monDom2|scaffold_24 (20280093-20280266) | |
| 70-307, gnl|monDom2|scaffold_24 (20280014-20280260) | |
| 70-307, gnl|oryCun1|scaffold_176026 (49925-50147) | |
| 70-307, gnl|oryCun1|scaffold_56150 (4-178) | |
| 70-307, gnl|panTro1|chr2 (125596820-125596993) | |
| 70-307, gnl|panTro1|chr2 (125501552-125501799) | |
| 70-307, gnl|rheMac2|chr2 (42698749-42698922) | |
| 70-307, gnl|rheMac2|chr2 (42601511-42601759) | |
| 70-307, gnl|rn3|chr11 (66811440-66811616) | |
| 70-307, gnl|rn3|chr11 (66811373-66811607) | |
| 70-307, gnl|tetNig1|chr2 (16117859-16118096) | |
| 70-307, gnl|xenTro1|scaffold_1014 (186489-186324) |