Mixn-0035a10
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GATAGGCAGTGACGGTGGTGAACACGGTCTCAGGGAAGTTGAATGTTTTCACTCCATCCC CAACCGGGACAGGTTTGGTGGGAGAAAGGTCGCTGCTGAAATCCTTGCGAATCACGTGAA CTCGAGGCTGGTATTTGTGCATGGAGTGAAGAATGATGTGTCCTTGATCATCCAGTTCAT TGTTGGTCAGCTTGAGTTTGTCGAAACTGACCACCTGTCTCATCCAAGTATCTCCAGAAG CTAGAGAATCAGGGTGTATATAGACTCTCGGGGGCACGGGGGAATCAGCGTTGCCAGCCA CCATCCACTTGGAGCTGTGATACACATATCTGTATCTTTTATTGTCCACAGGTACAATGT CCATTGCTATGTAGTATTGCTGGTGTGGATCTAGGCCGGTGATTTTCACTCTCATGGCAG GAAACATCCTCCTGCCTGCTTTGGTGATGATCATCTCAGTTCCAATGTCATGGAACCTCT TCCAGAGGTCAGCACATTGCAGCTCCACCTGAATCTCCTCCATGGAAGACATGGCAGCAG GCACAGGGCCTGCAGCCCCAGGGCCCAGGTCAGAGTGAGTGTCAAAGGAGCAGGAAGTCC GCTTCAGTGAGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GATAGGCAGTGACGGTGGTGAACACGGTCTCAGGGAAGTTGAATGTTTTCACTCCATCCC CAACCGGGACAGGTTTGGTGGGAGAAAGGTCGCTGCTGAAATCCTTGCGAATCACGTGAA CTCGAGGCTGGTATTTGTGCATGGAGTGAAGAATGATGTGTCCTTGATCATCCAGTTCAT TGTTGGTCAGCTTGAGTTTGTCGAAACTGACCACCTGTCTCATCCAAGTATCTCCAGAAG CTAGAGAATCAGGGTGTATATAGACTCTCGGGGGCACGGGGGAATCAGCGTTGCCAGCCA CCATCCACTTGGAGCTGTGATACACATATCTGTATCTTTTATTGTCCACAGGTACAATGT CCATTGCTATGTAGTATTGCTGGTGTGGATCTAGGCCGGTGATTTTCACTCTCATGGCAG GAAACATCCTCCTGCCTGCTTTGGTGATGATCATCTCAGTTCCAATGTCATGGAACCTCT TCCAGAGGTCAGCACATTGCAGCTCCACCTGAATCTCCTCCATGGAAGACATGGCAGCAG GCACAGGGCCTGCAGCCCCAGGGCCCAGGTCAGAGTGAGTGTCAAAGGAGCAGGAAGTCC GCTTCAGTGAGCA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
| 1-119, - strand, RNAz p=0.572645 | |
| 1-106, - strand, RNAz p=0.694693 | |
| 159-277, + strand, RNAz p=0.610729 | |
| 455-613, - strand, RNAz p=0.660112 |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1-119, - strand, RNAz p=0.572645 | |
| 1-106, - strand, RNAz p=0.694693 | |
| 159-277, + strand, RNAz p=0.610729 | |
| 455-613, - strand, RNAz p=0.660112 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of AK127536, - |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 1-157, gnl|bosTau2|chr9 (35788023-35787867) | |
| 1-157, gnl|canFam2|chr12 (47916868-47917058) | |
| 1-157, gnl|danRer3|chr23 (43742312-43742098) | |
| 1-157, gnl|dasNov1|scaffold_233 (263942-264133) | |
| 1-157, gnl|echTel1|scaffold_312509 (89002-88811) | |
| 1-157, gnl|fr1|chrUn (87880805-87880615) | |
| 1-157, gnl|galGal2|chr3 (75584880-75584683) | |
| 1-157, gnl|hg17|chr6 (85514355-85514546) | |
| 1-157, gnl|Hg17|chr6 (85514368-85514524) | |
| 1-157, gnl|loxAfr1|scaffold_1560 (73932-73741) | |
| 1-157, gnl|mm7|chr9 (87816653-87816843) | |
| 1-157, gnl|Mm7|chr9 (87816666-87816822) | |
| 1-157, gnl|monDom2|scaffold_0 (144952355-144952160) | |
| 1-157, gnl|oryCun1|scaffold_108580 (8605-8788) | |
| 1-157, gnl|panTro1|chr5 (87227638-87227829) | |
| 1-157, gnl|rheMac2|chr4 (80762237-80762428) | |
| 1-157, gnl|rn3|chr8 (93016287-93016477) | |
| 1-157, gnl|tetNig1|chr2 (17547547-17547742) | |
| 1-157, gnl|xenTro1|scaffold_73 (1542877-1542697) | |
| 159-332, gnl|bosTau2|chr3 (20725018-20724845) | |
| 159-332, gnl|canFam2|chr12 (47923627-47923832) | |
| 159-332, gnl|canFam2|chr17 (59194890-59195090) | |
| 159-332, gnl|danRer3|chr23 (43741720-43741519) | |
| 159-332, gnl|danRer3|chr9 (14561451-14561637) | |
| 159-332, gnl|dasNov1|scaffold_4769 (60685-60884) | |
| 159-332, gnl|dasNov1|scaffold_4769 (60685-60867) | |
| 159-332, gnl|echTel1|scaffold_287925 (49926-50121) | |
| 159-332, gnl|echTel1|scaffold_312509 (84199-83995) | |
| 159-332, gnl|fr1|chrUn (78269458-78269650) | |
| 159-332, gnl|fr1|chrUn (87880423-87880244) | |
| 159-332, gnl|galGal2|chr1 (72709751-72709555) | |
| 159-332, gnl|galGal2|chr3 (75578403-75578195) | |
| 159-332, gnl|hg17|chr1 (119179306-119179506) | |
| 159-332, gnl|Hg17|chr1 (119179312-119179485) | |
| 159-332, gnl|hg17|chr6 (85523120-85523325) | |
| 159-332, gnl|loxAfr1|scaffold_13971 (36979-36780) | |
| 159-332, gnl|loxAfr1|scaffold_1560 (66484-66279) | |
| 159-332, gnl|mm7|chr3 (99110357-99110157) | |
| 159-332, gnl|Mm7|chr3 (99110349-99110176) | |
| 159-332, gnl|mm7|chr9 (87825419-87825624) | |
| 159-332, gnl|monDom2|scaffold_0 (144943425-144943230) | |
| 159-332, gnl|monDom2|scaffold_82 (5575460-5575660) | |
| 159-332, gnl|oryCun1|scaffold_101966 (835-635) | |
| 159-332, gnl|oryCun1|scaffold_215389 (64371-64166) | |
| 159-332, gnl|panTro1|chr1 (119030936-119031136) | |
| 159-332, gnl|panTro1|chr5 (87236396-87236601) | |
| 159-332, gnl|rheMac2|chr1 (121838884-121839084) | |
| 159-332, gnl|rheMac2|chr4 (80770996-80771201) | |
| 159-332, gnl|rn3|chr2 (193984647-193984447) | |
| 159-332, gnl|rn3|chr8 (93024807-93025012) | |
| 159-332, gnl|tetNig1|chr2 (17549457-17549648) | |
| 159-332, gnl|tetNig1|chr2 (17549454-17549639) | |
| 159-332, gnl|xenTro1|scaffold_73 (1534511-1534315) | |
| 159-332, gnl|xenTro1|scaffold_819 (493784-493588) | |
| 419-613, gnl|bosTau2|chr3 (20717815-20717620) | |
| 419-613, gnl|Hg17|chr1 (119186268-119186464) | |
| 419-613, gnl|Mm7|chr3 (99104494-99104298) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-157, gnl|bosTau2|chr9 (35788023-35787867) | |
| 1-157, gnl|canFam2|chr12 (47916868-47917058) | |
| 1-157, gnl|danRer3|chr23 (43742312-43742098) | |
| 1-157, gnl|dasNov1|scaffold_233 (263942-264133) | |
| 1-157, gnl|echTel1|scaffold_312509 (89002-88811) | |
| 1-157, gnl|fr1|chrUn (87880805-87880615) | |
| 1-157, gnl|galGal2|chr3 (75584880-75584683) | |
| 1-157, gnl|hg17|chr6 (85514355-85514546) | |
| 1-157, gnl|Hg17|chr6 (85514368-85514524) | |
| 1-157, gnl|loxAfr1|scaffold_1560 (73932-73741) | |
| 1-157, gnl|mm7|chr9 (87816653-87816843) | |
| 1-157, gnl|Mm7|chr9 (87816666-87816822) | |
| 1-157, gnl|monDom2|scaffold_0 (144952355-144952160) | |
| 1-157, gnl|oryCun1|scaffold_108580 (8605-8788) | |
| 1-157, gnl|panTro1|chr5 (87227638-87227829) | |
| 1-157, gnl|rheMac2|chr4 (80762237-80762428) | |
| 1-157, gnl|rn3|chr8 (93016287-93016477) | |
| 1-157, gnl|tetNig1|chr2 (17547547-17547742) | |
| 1-157, gnl|xenTro1|scaffold_73 (1542877-1542697) | |
| 159-332, gnl|bosTau2|chr3 (20725018-20724845) | |
| 159-332, gnl|canFam2|chr12 (47923627-47923832) | |
| 159-332, gnl|canFam2|chr17 (59194890-59195090) | |
| 159-332, gnl|danRer3|chr23 (43741720-43741519) | |
| 159-332, gnl|danRer3|chr9 (14561451-14561637) | |
| 159-332, gnl|dasNov1|scaffold_4769 (60685-60884) | |
| 159-332, gnl|dasNov1|scaffold_4769 (60685-60867) | |
| 159-332, gnl|echTel1|scaffold_287925 (49926-50121) | |
| 159-332, gnl|echTel1|scaffold_312509 (84199-83995) | |
| 159-332, gnl|fr1|chrUn (78269458-78269650) | |
| 159-332, gnl|fr1|chrUn (87880423-87880244) | |
| 159-332, gnl|galGal2|chr1 (72709751-72709555) | |
| 159-332, gnl|galGal2|chr3 (75578403-75578195) | |
| 159-332, gnl|hg17|chr1 (119179306-119179506) | |
| 159-332, gnl|Hg17|chr1 (119179312-119179485) | |
| 159-332, gnl|hg17|chr6 (85523120-85523325) | |
| 159-332, gnl|loxAfr1|scaffold_13971 (36979-36780) | |
| 159-332, gnl|loxAfr1|scaffold_1560 (66484-66279) | |
| 159-332, gnl|mm7|chr3 (99110357-99110157) | |
| 159-332, gnl|Mm7|chr3 (99110349-99110176) | |
| 159-332, gnl|mm7|chr9 (87825419-87825624) | |
| 159-332, gnl|monDom2|scaffold_0 (144943425-144943230) | |
| 159-332, gnl|monDom2|scaffold_82 (5575460-5575660) | |
| 159-332, gnl|oryCun1|scaffold_101966 (835-635) | |
| 159-332, gnl|oryCun1|scaffold_215389 (64371-64166) | |
| 159-332, gnl|panTro1|chr1 (119030936-119031136) | |
| 159-332, gnl|panTro1|chr5 (87236396-87236601) | |
| 159-332, gnl|rheMac2|chr1 (121838884-121839084) | |
| 159-332, gnl|rheMac2|chr4 (80770996-80771201) | |
| 159-332, gnl|rn3|chr2 (193984647-193984447) | |
| 159-332, gnl|rn3|chr8 (93024807-93025012) | |
| 159-332, gnl|tetNig1|chr2 (17549457-17549648) | |
| 159-332, gnl|tetNig1|chr2 (17549454-17549639) | |
| 159-332, gnl|xenTro1|scaffold_73 (1534511-1534315) | |
| 159-332, gnl|xenTro1|scaffold_819 (493784-493588) | |
| 419-613, gnl|bosTau2|chr3 (20717815-20717620) | |
| 419-613, gnl|Hg17|chr1 (119186268-119186464) | |
| 419-613, gnl|Mm7|chr3 (99104494-99104298) |