Mixn-0035j13
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAAAATTGGATAATAAACAAAACGTAGACTGGAATAAACTGATCAAGCGGGCAGTTGAG GGCTTGGCGGAGTCCGGTGGCTCAACTTTGAAAAGCATCGAACGTTTTTTGAAAGGTCAG AAGGATGTGTCTGCATCATTTGGAGGCGGTGCTGCCTCTGGCTTTCACCAGCAGTTACGA TTGGCTATTAAACGTGCCGTTGGCCACGGCAGACTCCTTAAAGATGGACCCCTTTATCGG CTCAACACTAAAGCAACCAGTGTGGATGGGAAAGAGAGTTGTGAGTCTCTTTCCTCTTTA CCTCCAGTGTCACTCCTTCCACATGAAAAGGATAAGCCGGTTGCTGAACCAATCCCCATC TGTAGTTTCTGTCTTGGTACAAAAGAACAAAACCGGGAAAAGAAGCCAGAGGAACTCATC TCCTGTGCAGACTGTGGCAACAGTGGTCATCCATCCTGTTTAAAGTTTTCCCCCGAACTA ACGGTTAGAGTGAAGGCCTTACGGTGGCAGTGCATCGAGTGTAAGACGTGCAGCTCCTGT CGAGATCAGGGCAAAAATGCGGATAACATGCTCTTCTGTGATTCCTGTGACCGGGGTTTT CATATGGAGTGTTGTGATCCACCACTCACTCGGATGCCAAAAGGCATGTGGATATGTCAA ATATGTCGACCTAGGAAAAAAGGACGGAAACTTCTACAGAAGAAGGCGGCACAGATAAAA CGGCGCTATGCTAATCCAATAGGACGTCCAAAAAAAAAAA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAAAATTGGATAATAAACAAAACGTAGACTGGAATAAACTGATCAAGCGGGCAGTTGAG GGCTTGGCGGAGTCCGGTGGCTCAACTTTGAAAAGCATCGAACGTTTTTTGAAAGGTCAG AAGGATGTGTCTGCATCATTTGGAGGCGGTGCTGCCTCTGGCTTTCACCAGCAGTTACGA TTGGCTATTAAACGTGCCGTTGGCCACGGCAGACTCCTTAAAGATGGACCCCTTTATCGG CTCAACACTAAAGCAACCAGTGTGGATGGGAAAGAGAGTTGTGAGTCTCTTTCCTCTTTA CCTCCAGTGTCACTCCTTCCACATGAAAAGGATAAGCCGGTTGCTGAACCAATCCCCATC TGTAGTTTCTGTCTTGGTACAAAAGAACAAAACCGGGAAAAGAAGCCAGAGGAACTCATC TCCTGTGCAGACTGTGGCAACAGTGGTCATCCATCCTGTTTAAAGTTTTCCCCCGAACTA ACGGTTAGAGTGAAGGCCTTACGGTGGCAGTGCATCGAGTGTAAGACGTGCAGCTCCTGT CGAGATCAGGGCAAAAATGCGGATAACATGCTCTTCTGTGATTCCTGTGACCGGGGTTTT CATATGGAGTGTTGTGATCCACCACTCACTCGGATGCCAAAAGGCATGTGGATATGTCAA ATATGTCGACCTAGGAAAAAAGGACGGAAACTTCTACAGAAGAAGGCGGCACAGATAAAA CGGCGCTATGCTAATCCAATAGGACGTCCAAAAAAAAAAA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 219-336, - strand, RNAz p=0.694389 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 219-336, - strand, RNAz p=0.694389 |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 1-336, gnl|bosTau2|chr27 (23425879-23425544) | |
| 1-336, gnl|canFam2|chr16 (26562238-26561890) | |
| 1-336, gnl|danRer3|chr9 (26200434-26200800) | |
| 1-336, gnl|dasNov1|scaffold_130552 (9448-9095) | |
| 1-336, gnl|echTel1|scaffold_276479 (46610-46262) | |
| 1-336, gnl|fr1|chrUn (62769661-62770004) | |
| 1-336, gnl|galGal2|chrUn (872374-872725) | |
| 1-336, gnl|hg17|chr8 (42025049-42025397) | |
| 1-336, gnl|Hg17|chr8 (42025388-42025053) | |
| 1-336, gnl|loxAfr1|scaffold_6105 (56863-57216) | |
| 1-336, gnl|mm7|chr8 (21648124-21647776) | |
| 1-336, gnl|Mm7|chr8 (21647783-21648118) | |
| 1-336, gnl|monDom2|scaffold_1 (80008249-80007901) | |
| 1-336, gnl|oryCun1|scaffold_177865 (4413-4060) | |
| 1-336, gnl|panTro1|chr7 (43443043-43443391) | |
| 1-336, gnl|rheMac2|chr8 (42621377-42621725) | |
| 1-336, gnl|rn3|chr16 (73631908-73632256) | |
| 1-336, gnl|tetNig1|chr12 (11275869-11275529) | |
| 1-336, gnl|xenTro1|scaffold_106 (469498-469159) | |
| 445-560, gnl|bosTau2|chr23 (28315071-28314956) | |
| 445-560, gnl|canFam2|chr16 (26621838-26621713) | |
| 445-560, gnl|danRer3|chr9 (26171811-26171933) | |
| 445-560, gnl|dasNov1|scaffold_86120 (7360-7485) | |
| 445-560, gnl|echTel1|scaffold_121716 (817-692) | |
| 445-560, gnl|fr1|chrUn (62764971-62765096) | |
| 445-560, gnl|galGal2|chrUn (862767-862890) | |
| 445-560, gnl|hg17|chr8 (41958507-41958632) | |
| 445-560, gnl|Hg17|chr8 (41958630-41958515) | |
| 445-560, gnl|loxAfr1|scaffold_2557 (31843-31718) | |
| 445-560, gnl|mm7|chr8 (21693087-21692962) | |
| 445-560, gnl|Mm7|chr8 (21692962-21693077) | |
| 445-560, gnl|monDom2|scaffold_1 (80094792-80094667) | |
| 445-560, gnl|oryCun1|scaffold_165916 (5792-5667) | |
| 445-560, gnl|panTro1|chr7 (43376139-43376264) | |
| 445-560, gnl|rheMac2|chr8 (42552808-42552933) | |
| 445-560, gnl|rn3|chr16 (73589594-73589719) | |
| 445-560, gnl|tetNig1|chr12 (11282540-11282417) | |
| 445-560, gnl|xenTro1|scaffold_106 (481435-481310) | |
| 642-755, gnl|bosTau2|chr23 (28313228-28313115) | |
| 642-755, gnl|canFam2|chr16 (26625285-26625123) | |
| 642-755, gnl|danRer3|chr9 (26171337-26171469) | |
| 642-755, gnl|dasNov1|scaffold_86120 (4227-4389) | |
| 642-755, gnl|echTel1|scaffold_292625 (57626-57464) | |
| 642-755, gnl|fr1|chrUn (212293271-212293136) | |
| 642-755, gnl|galGal2|chrUn (861514-861675) | |
| 642-755, gnl|hg17|chr8 (41955310-41955472) | |
| 642-755, gnl|Hg17|chr8 (41955454-41955341) | |
| 642-755, gnl|loxAfr1|scaffold_2557 (34644-34482) | |
| 642-755, gnl|mm7|chr8 (21695593-21695431) | |
| 642-755, gnl|Mm7|chr8 (21695447-21695560) | |
| 642-755, gnl|monDom2|scaffold_1 (80096265-80096102) | |
| 642-755, gnl|oryCun1|scaffold_165916 (9351-9189) | |
| 642-755, gnl|panTro1|chr7 (43372931-43373093) | |
| 642-755, gnl|rheMac2|chr9 (62026953-62027105) | |
| 642-755, gnl|rn3|chr16 (73586548-73586710) | |
| 642-755, gnl|tetNig1|chr12 (11283314-11283189) | |
| 642-755, gnl|xenTro1|scaffold_106 (481961-481810) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-336, gnl|bosTau2|chr27 (23425879-23425544) | |
| 1-336, gnl|canFam2|chr16 (26562238-26561890) | |
| 1-336, gnl|danRer3|chr9 (26200434-26200800) | |
| 1-336, gnl|dasNov1|scaffold_130552 (9448-9095) | |
| 1-336, gnl|echTel1|scaffold_276479 (46610-46262) | |
| 1-336, gnl|fr1|chrUn (62769661-62770004) | |
| 1-336, gnl|galGal2|chrUn (872374-872725) | |
| 1-336, gnl|hg17|chr8 (42025049-42025397) | |
| 1-336, gnl|Hg17|chr8 (42025388-42025053) | |
| 1-336, gnl|loxAfr1|scaffold_6105 (56863-57216) | |
| 1-336, gnl|mm7|chr8 (21648124-21647776) | |
| 1-336, gnl|Mm7|chr8 (21647783-21648118) | |
| 1-336, gnl|monDom2|scaffold_1 (80008249-80007901) | |
| 1-336, gnl|oryCun1|scaffold_177865 (4413-4060) | |
| 1-336, gnl|panTro1|chr7 (43443043-43443391) | |
| 1-336, gnl|rheMac2|chr8 (42621377-42621725) | |
| 1-336, gnl|rn3|chr16 (73631908-73632256) | |
| 1-336, gnl|tetNig1|chr12 (11275869-11275529) | |
| 1-336, gnl|xenTro1|scaffold_106 (469498-469159) | |
| 445-560, gnl|bosTau2|chr23 (28315071-28314956) | |
| 445-560, gnl|canFam2|chr16 (26621838-26621713) | |
| 445-560, gnl|danRer3|chr9 (26171811-26171933) | |
| 445-560, gnl|dasNov1|scaffold_86120 (7360-7485) | |
| 445-560, gnl|echTel1|scaffold_121716 (817-692) | |
| 445-560, gnl|fr1|chrUn (62764971-62765096) | |
| 445-560, gnl|galGal2|chrUn (862767-862890) | |
| 445-560, gnl|hg17|chr8 (41958507-41958632) | |
| 445-560, gnl|Hg17|chr8 (41958630-41958515) | |
| 445-560, gnl|loxAfr1|scaffold_2557 (31843-31718) | |
| 445-560, gnl|mm7|chr8 (21693087-21692962) | |
| 445-560, gnl|Mm7|chr8 (21692962-21693077) | |
| 445-560, gnl|monDom2|scaffold_1 (80094792-80094667) | |
| 445-560, gnl|oryCun1|scaffold_165916 (5792-5667) | |
| 445-560, gnl|panTro1|chr7 (43376139-43376264) | |
| 445-560, gnl|rheMac2|chr8 (42552808-42552933) | |
| 445-560, gnl|rn3|chr16 (73589594-73589719) | |
| 445-560, gnl|tetNig1|chr12 (11282540-11282417) | |
| 445-560, gnl|xenTro1|scaffold_106 (481435-481310) | |
| 642-755, gnl|bosTau2|chr23 (28313228-28313115) | |
| 642-755, gnl|canFam2|chr16 (26625285-26625123) | |
| 642-755, gnl|danRer3|chr9 (26171337-26171469) | |
| 642-755, gnl|dasNov1|scaffold_86120 (4227-4389) | |
| 642-755, gnl|echTel1|scaffold_292625 (57626-57464) | |
| 642-755, gnl|fr1|chrUn (212293271-212293136) | |
| 642-755, gnl|galGal2|chrUn (861514-861675) | |
| 642-755, gnl|hg17|chr8 (41955310-41955472) | |
| 642-755, gnl|Hg17|chr8 (41955454-41955341) | |
| 642-755, gnl|loxAfr1|scaffold_2557 (34644-34482) | |
| 642-755, gnl|mm7|chr8 (21695593-21695431) | |
| 642-755, gnl|Mm7|chr8 (21695447-21695560) | |
| 642-755, gnl|monDom2|scaffold_1 (80096265-80096102) | |
| 642-755, gnl|oryCun1|scaffold_165916 (9351-9189) | |
| 642-755, gnl|panTro1|chr7 (43372931-43373093) | |
| 642-755, gnl|rheMac2|chr9 (62026953-62027105) | |
| 642-755, gnl|rn3|chr16 (73586548-73586710) | |
| 642-755, gnl|tetNig1|chr12 (11283314-11283189) | |
| 642-755, gnl|xenTro1|scaffold_106 (481961-481810) |