Non-Coding RNA Search

Mixn-0035n18

Sequence:


               
               CGAGGGGGCTGTGTCTCAAACATCCACCTGTAGCCCTGCACATCACCTCCCACGACCTGC
ATGAAGGTGGCCTTTGCCATCCTGCAGGGCGTACACTGGGGACCCTATGTCTTGGGACTG
CTCAGCAGAATCAGTTCCTTCTGCTCTGCTTACATTCCCACGGGCCAAAGCTTCACCCTG
CCCGATGCTATCCAGGGGAAGGGTCTCGAAAAGATTCTTGAAGGTCTTTACATCCCCCTT
CACCACATCCCCCTGGGGCGCACACTGAGAGAGGGACAGCGCTGAGGAGCCATCGCTGGA
TAGATGCTCACGTGTGAACCCCTTACTCTCCTGGGGACCCACTCGCTGCAGGTGGCCCAC
TTGGACCTTGTCTCTAGGTGTGTCCAGGGGCTTTGTCTCAAATAGCCACAGGGTGGAGCG
GACATCACCAGGGACCACTTCCTCTTTGGGTGGGACCTCTGCTTCAGCCTCCTCTTCCCC
CTTGAGAGTGTCTAGTGGTCGGGTCTCAAACAGGTGCCGCTGCTGCTGAACATCTGGGCC
AGGAGGGATAAGATCTGGGGATGGCTGGAAGTCCTTCTCGTCCACCAAGATCTCCCGGAT
GGCATCCAGGGGCTGTGTCTCAAAGATCCAGCGAGTTGCGCTAACATCAGGCCGGGCTGC
CTCCTCCAGGAGATCCCCCGAATCACCCGCACCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGAGGGGGCTGTGTCTCAAACATCCACCTGTAGCCCTGCACATCACCTCCCACGACCTGC
ATGAAGGTGGCCTTTGCCATCCTGCAGGGCGTACACTGGGGACCCTATGTCTTGGGACTG
CTCAGCAGAATCAGTTCCTTCTGCTCTGCTTACATTCCCACGGGCCAAAGCTTCACCCTG
CCCGATGCTATCCAGGGGAAGGGTCTCGAAAAGATTCTTGAAGGTCTTTACATCCCCCTT
CACCACATCCCCCTGGGGCGCACACTGAGAGAGGGACAGCGCTGAGGAGCCATCGCTGGA
TAGATGCTCACGTGTGAACCCCTTACTCTCCTGGGGACCCACTCGCTGCAGGTGGCCCAC
TTGGACCTTGTCTCTAGGTGTGTCCAGGGGCTTTGTCTCAAATAGCCACAGGGTGGAGCG
GACATCACCAGGGACCACTTCCTCTTTGGGTGGGACCTCTGCTTCAGCCTCCTCTTCCCC
CTTGAGAGTGTCTAGTGGTCGGGTCTCAAACAGGTGCCGCTGCTGCTGAACATCTGGGCC
AGGAGGGATAAGATCTGGGGATGGCTGGAAGTCCTTCTCGTCCACCAAGATCTCCCGGAT
GGCATCCAGGGGCTGTGTCTCAAAGATCCAGCGAGTTGCGCTAACATCAGGCCGGGCTGC
CTCCTCCAGGAGATCCCCCGAATCACCCGCACCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               98-217, - strand, RNAz p=0.879624

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               98-217, - strand, RNAz p=0.879624

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of AJ626900, -

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of AJ626900, -

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               59-694, gnl|bosTau2|chr22 (9923694-9924330)
               

               
               59-694, gnl|Hg17|chr3 (39204457-39205081)
               

               
               59-694, gnl|Mm7|chr9 (119714215-119714851)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               59-694, gnl|bosTau2|chr22 (9923694-9924330)
               

               
               59-694, gnl|Hg17|chr3 (39204457-39205081)
               

               
               59-694, gnl|Mm7|chr9 (119714215-119714851)

	59-694, gnl\|bosTau2\|chr22 (9923694-9924330)
	59-694, gnl\|Hg17\|chr3 (39204457-39205081)
	59-694, gnl\|Mm7\|chr9 (119714215-119714851)