Non-Coding RNA Search

Mixn-0035p05

Sequence:


               
               CGCACACACACATACACACACACACACACAGCCTCCTCCCTTCTCCTAACCCGCCCCGCC
CCCGCCGCTAGACGCCGCCGCGGCCGGCTCACGCACGCTGTAAACTTTTGACCCTCCAAC
TTTGCGACCCCTCCGGCAATAACACTGGCCTCACCGCCCAGTGTCTCATTCTGCTGCACC
GGCTGCAGAAACCCAAATGCCAAACGCCTTCCCTGCCCTTCCCCCTTCGCCCCCTCCCGC
CCCCGCCCCCGCCCCCATCCCCGCCCCCACGAAAGGCCTTGGACTGGGGAAGAAGAGTCA
GCTTCGGATTATTAAATAACTCCTCTTCAGGGAAAAGATGCCGACTCCACTTCCGGCTTT
CTTCTCCACTTCCCGCATTTTCACCAGCCCCTCTGGTTAATTTGCCTGGAAGGCTTTTGA
TGACCCACCCCACTCAATTCCTGCCCCTGAGATTGGGGCCGCGGTTGCTGGGGGAGGGGA
CATTTGGGAAGCCATAGAAAGGGCTGACCTGGAGAAAGGTGTTTCAGGGTGGAGAAGCGT
GGAGAGAGCTTGGAGCAAGTATTCCTTGGGAGTGGAGGGGGCCACAGGCCCCATGGAGGC
TGGAGAGAGAGCTCAGTGTCCAGTCTCTGCAAGGCCCAGCGGGCCCGGGGCCACCTTGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CGCACACACACATACACACACACACACACAGCCTCCTCCCTTCTCCTAACCCGCCCCGCC
CCCGCCGCTAGACGCCGCCGCGGCCGGCTCACGCACGCTGTAAACTTTTGACCCTCCAAC
TTTGCGACCCCTCCGGCAATAACACTGGCCTCACCGCCCAGTGTCTCATTCTGCTGCACC
GGCTGCAGAAACCCAAATGCCAAACGCCTTCCCTGCCCTTCCCCCTTCGCCCCCTCCCGC
CCCCGCCCCCGCCCCCATCCCCGCCCCCACGAAAGGCCTTGGACTGGGGAAGAAGAGTCA
GCTTCGGATTATTAAATAACTCCTCTTCAGGGAAAAGATGCCGACTCCACTTCCGGCTTT
CTTCTCCACTTCCCGCATTTTCACCAGCCCCTCTGGTTAATTTGCCTGGAAGGCTTTTGA
TGACCCACCCCACTCAATTCCTGCCCCTGAGATTGGGGCCGCGGTTGCTGGGGGAGGGGA
CATTTGGGAAGCCATAGAAAGGGCTGACCTGGAGAAAGGTGTTTCAGGGTGGAGAAGCGT
GGAGAGAGCTTGGAGCAAGTATTCCTTGGGAGTGGAGGGGGCCACAGGCCCCATGGAGGC
TGGAGAGAGAGCTCAGTGTCCAGTCTCTGCAAGGCCCAGCGGGCCCGGGGCCACCTTGC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               255-362, - strand, RNAz p=0.996954

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               255-362, - strand, RNAz p=0.996954

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               51-659, gnl|bosTau2|chr19 (31203309-31203939)
               

               
               51-659, gnl|Hg17|chr17 (44017271-44017840)
               

               
               51-659, gnl|Mm7|chr11 (96421405-96420850)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               51-659, gnl|bosTau2|chr19 (31203309-31203939)
               

               
               51-659, gnl|Hg17|chr17 (44017271-44017840)
               

               
               51-659, gnl|Mm7|chr11 (96421405-96420850)

	51-659, gnl\|bosTau2\|chr19 (31203309-31203939)
	51-659, gnl\|Hg17\|chr17 (44017271-44017840)
	51-659, gnl\|Mm7\|chr11 (96421405-96420850)