Mixn-0036m14
|
GGGCTGCATGCCCTGGGCATCACTGATCTCTGCCTGATACTGCCCAGCAAGGGTGAGGGC
ACTCCTCATACTTACTACCGATTGCCCCGCAACCTCAACCTTGGCATGTGGGGCCCCGCA
GTGTACCTGTGCTACAAGGTGGGCTTGGCCAAGGCCAACACGCTGGTGTATGAGGCAGAG
ACCCCGTATCCTGGTGCAGATGTCTCCCTATGACAACCTGCTCCTCTGCCAGCCTGTATC
CTCACCCCTGCCCCTCAGTGGTGCCAGCTTCCTGCAGCTGCTGCAAAGCCTGGACCCTGA
GCAGGCTATCGTGCTGCTGCTGGCTGTGCTCACAGAGCAAAAACTACTAGTCCACTCGCT
GCGGCCAGACCTGCTCACCAGCGTCTGCGAAGCCCTGGTCTCTATGATCTTCCCGCTGCA
CTGGCAGTGCCCCTACATTCCGCTGTGCCCGCTGGTGCTGGCCGATGTGCTGAGTGCCCC
CGTGCCCTTCATTGTGGGTATCCACTCCAGTTATTTCGATCTGCATGAACCCGCCCGCTG
ATGTCATTTGCGTTGATCTGGATACCAAACACGCTCTTCCCGAGTGAGGAAAAGAAACCC
CCTCTCCCCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GGGCTGCATGCCCTGGGCATCACTGATCTCTGCCTGATACTGCCCAGCAAGGGTGAGGGC
ACTCCTCATACTTACTACCGATTGCCCCGCAACCTCAACCTTGGCATGTGGGGCCCCGCA
GTGTACCTGTGCTACAAGGTGGGCTTGGCCAAGGCCAACACGCTGGTGTATGAGGCAGAG
ACCCCGTATCCTGGTGCAGATGTCTCCCTATGACAACCTGCTCCTCTGCCAGCCTGTATC
CTCACCCCTGCCCCTCAGTGGTGCCAGCTTCCTGCAGCTGCTGCAAAGCCTGGACCCTGA
GCAGGCTATCGTGCTGCTGCTGGCTGTGCTCACAGAGCAAAAACTACTAGTCCACTCGCT
GCGGCCAGACCTGCTCACCAGCGTCTGCGAAGCCCTGGTCTCTATGATCTTCCCGCTGCA
CTGGCAGTGCCCCTACATTCCGCTGTGCCCGCTGGTGCTGGCCGATGTGCTGAGTGCCCC
CGTGCCCTTCATTGTGGGTATCCACTCCAGTTATTTCGATCTGCATGAACCCGCCCGCTG
ATGTCATTTGCGTTGATCTGGATACCAAACACGCTCTTCCCGAGTGAGGAAAAGAAACCC
CCTCTCCCCT
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
249-407, gnl|bosTau2|chr3 (8123531-8123374) |
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249-407, gnl|canFam2|chr7 (46164295-46164121) |
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249-407, gnl|danRer3|chr18 (20060701-20060540) |
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249-407, gnl|dasNov1|scaffold_7382 (86945-87103) |
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249-407, gnl|echTel1|scaffold_200774 (3370-3536) |
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249-407, gnl|fr1|chrUn (260026535-260026380) |
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249-407, gnl|hg17|chr1 (150726436-150726610) |
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249-407, gnl|Hg17|chr1 (150726606-150726449) |
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249-407, gnl|loxAfr1|scaffold_47637 (3700-3526) |
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249-407, gnl|mm7|chr3 (90401345-90401171) |
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249-407, gnl|Mm7|chr3 (90401173-90401330) |
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249-407, gnl|monDom2|scaffold_59 (4142684-4142506) |
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249-407, gnl|oryCun1|scaffold_198987 (67523-67349) |
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249-407, gnl|panTro1|chr1 (132707292-132707466) |
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249-407, gnl|rheMac2|chr1 (132457015-132457189) |
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249-407, gnl|rn3|chr2 (182463667-182463493) |
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249-407, gnl|xenTro1|scaffold_208 (67954-67791) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
249-407, gnl|bosTau2|chr3 (8123531-8123374) |
|
249-407, gnl|canFam2|chr7 (46164295-46164121) |
|
249-407, gnl|danRer3|chr18 (20060701-20060540) |
|
249-407, gnl|dasNov1|scaffold_7382 (86945-87103) |
|
249-407, gnl|echTel1|scaffold_200774 (3370-3536) |
|
249-407, gnl|fr1|chrUn (260026535-260026380) |
|
249-407, gnl|hg17|chr1 (150726436-150726610) |
|
249-407, gnl|Hg17|chr1 (150726606-150726449) |
|
249-407, gnl|loxAfr1|scaffold_47637 (3700-3526) |
|
249-407, gnl|mm7|chr3 (90401345-90401171) |
|
249-407, gnl|Mm7|chr3 (90401173-90401330) |
|
249-407, gnl|monDom2|scaffold_59 (4142684-4142506) |
|
249-407, gnl|oryCun1|scaffold_198987 (67523-67349) |
|
249-407, gnl|panTro1|chr1 (132707292-132707466) |
|
249-407, gnl|rheMac2|chr1 (132457015-132457189) |
|
249-407, gnl|rn3|chr2 (182463667-182463493) |
|
249-407, gnl|xenTro1|scaffold_208 (67954-67791) |
