Mus1-POSM0100009_G06F
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CCACGCGTCCGCAAAGGGAGCTTCTGCCCATCGCCCGAGAACAGCGGGGGCAGCTTCCAG GAGGGCAGAGAGGGCATCGCAGCCCGCCTGACAGAGAGCCTGTTCCTTGACCTTCTCGGG GATGAGAGTGGGGCCTTTAGCCCCCAGGGCATGGGACAGTCCTGCCTTCTCCCACCTTTG GAAAACGCCAGTGCCCCGATGCCCTGGGCCGAGTTCCCAAGGGTGGGATCCCCCGAGGCA TCGTCCCAGGGCAAGGAGCAGCCTTTGAACCCAGAGCCAAGTCCTCAGGCCACCCCGACC CAGAGCCTAGCCAGCCTGGCTTTCCCAGAGCTGCCTGCTGTCATCGCCGACAACCCCGCC TACCGCAGCTTCAGCACCTTCCTGAGCCAGTCCTCAGATCCCGGAGAGCTGGACTCGGAC CCAGAGCTGGCGGAAGCCCTGGAGGAAGTGGAGCCCAGCCTCCCTGCTGCCCCCCAGCCC TCTGAGCCACCCCCTACACTCCAGCCTGAGCCAGAAACCTGGGAGCAGATCCTGCGCCAG AGTGTCCTCCAGCGCAGGGCGGCCCCGGCCCCCGCCTCGGGCCCCANCAGCAGCGGCTAC CGGGAGTTTGTGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CCACGCGTCCGCAAAGGGAGCTTCTGCCCATCGCCCGAGAACAGCGGGGGCAGCTTCCAG GAGGGCAGAGAGGGCATCGCAGCCCGCCTGACAGAGAGCCTGTTCCTTGACCTTCTCGGG GATGAGAGTGGGGCCTTTAGCCCCCAGGGCATGGGACAGTCCTGCCTTCTCCCACCTTTG GAAAACGCCAGTGCCCCGATGCCCTGGGCCGAGTTCCCAAGGGTGGGATCCCCCGAGGCA TCGTCCCAGGGCAAGGAGCAGCCTTTGAACCCAGAGCCAAGTCCTCAGGCCACCCCGACC CAGAGCCTAGCCAGCCTGGCTTTCCCAGAGCTGCCTGCTGTCATCGCCGACAACCCCGCC TACCGCAGCTTCAGCACCTTCCTGAGCCAGTCCTCAGATCCCGGAGAGCTGGACTCGGAC CCAGAGCTGGCGGAAGCCCTGGAGGAAGTGGAGCCCAGCCTCCCTGCTGCCCCCCAGCCC TCTGAGCCACCCCCTACACTCCAGCCTGAGCCAGAAACCTGGGAGCAGATCCTGCGCCAG AGTGTCCTCCAGCGCAGGGCGGCCCCGGCCCCCGCCTCGGGCCCCANCAGCAGCGGCTAC CGGGAGTTTGTGCA |
| Predicted RNA structure(s): 4 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
| 13-104, - strand, RNAz p=0.736079 | |
| 169-288, - strand, RNAz p=0.677613 | |
| 369-479, - strand, RNAz p=0.894031 | |
| 490-614, - strand, RNAz p=0.677145 |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 13-104, - strand, RNAz p=0.736079 | |
| 169-288, - strand, RNAz p=0.677613 | |
| 369-479, - strand, RNAz p=0.894031 | |
| 490-614, - strand, RNAz p=0.677145 |
| Predicted microRNA(s): 2 entry(ies) | More info |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
| 505-625, - strand, RNAmicro p=0.999945 | |
| 178-345, - strand, RNAmicro p=0.999327 |
| Predicted microRNA(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
| 505-625, - strand, RNAmicro p=0.999945 | |
| 178-345, - strand, RNAmicro p=0.999327 |
| Aligned organism(s): 26 entry(ies) | More info |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
| 13-479, gnl|bosTau2|chr25 (21508301-21508764) | |
| 13-479, gnl|canFam2|chr6 (22273954-22273441) | |
| 13-479, gnl|dasNov1|scaffold_178517 (459-4) | |
| 13-479, gnl|echTel1|scaffold_184255 (4663-5146) | |
| 13-479, gnl|hg17|chr16 (27281152-27281668) | |
| 13-479, gnl|Hg17|chr16 (27281315-27281808) | |
| 13-479, gnl|loxAfr1|scaffold_61189 (12641-12170) | |
| 13-479, gnl|mm7|chr7 (121672160-121672682) | |
| 13-479, gnl|Mm7|chr7 (121672329-121672798) | |
| 13-479, gnl|monDom2|scaffold_5 (117797952-117798561) | |
| 13-479, gnl|oryCun1|scaffold_190052 (7883-8339) | |
| 13-479, gnl|panTro1|chr18 (27978988-27979504) | |
| 13-479, gnl|rheMac2|chr20 (25812791-25813307) | |
| 13-479, gnl|rn3|chr1 (184785395-184785896) | |
| 490-614, gnl|bosTau2|chr25 (21508748-21508869) | |
| 490-614, gnl|canFam2|chr6 (22273353-22273079) | |
| 490-614, gnl|echTel1|scaffold_184255 (5234-5499) | |
| 490-614, gnl|hg17|chr16 (27281756-27282030) | |
| 490-614, gnl|Hg17|chr16 (27281765-27281913) | |
| 490-614, gnl|loxAfr1|scaffold_61189 (12082-11772) | |
| 490-614, gnl|mm7|chr7 (121672770-121673035) | |
| 490-614, gnl|Mm7|chr7 (121672779-121672918) | |
| 490-614, gnl|monDom2|scaffold_5 (117798685-117798989) | |
| 490-614, gnl|oryCun1|scaffold_190052 (8434-8688) | |
| 490-614, gnl|panTro1|chr18 (27979592-27979866) | |
| 490-614, gnl|rn3|chr1 (184785984-184786246) |
| Aligned organism(s): 26 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 13-479, gnl|bosTau2|chr25 (21508301-21508764) | |
| 13-479, gnl|canFam2|chr6 (22273954-22273441) | |
| 13-479, gnl|dasNov1|scaffold_178517 (459-4) | |
| 13-479, gnl|echTel1|scaffold_184255 (4663-5146) | |
| 13-479, gnl|hg17|chr16 (27281152-27281668) | |
| 13-479, gnl|Hg17|chr16 (27281315-27281808) | |
| 13-479, gnl|loxAfr1|scaffold_61189 (12641-12170) | |
| 13-479, gnl|mm7|chr7 (121672160-121672682) | |
| 13-479, gnl|Mm7|chr7 (121672329-121672798) | |
| 13-479, gnl|monDom2|scaffold_5 (117797952-117798561) | |
| 13-479, gnl|oryCun1|scaffold_190052 (7883-8339) | |
| 13-479, gnl|panTro1|chr18 (27978988-27979504) | |
| 13-479, gnl|rheMac2|chr20 (25812791-25813307) | |
| 13-479, gnl|rn3|chr1 (184785395-184785896) | |
| 490-614, gnl|bosTau2|chr25 (21508748-21508869) | |
| 490-614, gnl|canFam2|chr6 (22273353-22273079) | |
| 490-614, gnl|echTel1|scaffold_184255 (5234-5499) | |
| 490-614, gnl|hg17|chr16 (27281756-27282030) | |
| 490-614, gnl|Hg17|chr16 (27281765-27281913) | |
| 490-614, gnl|loxAfr1|scaffold_61189 (12082-11772) | |
| 490-614, gnl|mm7|chr7 (121672770-121673035) | |
| 490-614, gnl|Mm7|chr7 (121672779-121672918) | |
| 490-614, gnl|monDom2|scaffold_5 (117798685-117798989) | |
| 490-614, gnl|oryCun1|scaffold_190052 (8434-8688) | |
| 490-614, gnl|panTro1|chr18 (27979592-27979866) | |
| 490-614, gnl|rn3|chr1 (184785984-184786246) |