Non-Coding RNA Search

Mus1-POSM0100009_G12F

Sequence:


               
               CCACGCGTCCGCCCACTCACCCAGACCTTGCCTGCAAAGCCAGCTCTCATACCCCCTCGC
CCACCCCCTCTTTGATCCCCGACAGCCCAACCTAAACCTCTGGGCCCAAGGATGCCACGA
AGTGCTGCTGGGGCACCTGCAGGGGCTGGCGAGCACACTGGGCAACATGCTGGCTGTCAC
CTTCCTGCTGCAGACACTGGTGCTCCTGGGCCTGCGGTACCTGCAGACGGCCCTGGAGGG
GCTCGGAGGAATCATCGATGGGGAGGAAGAGGCCCAGGGCTATCTCTTTCCCGGTGGGCT
GAAAGACATGCTGAAAACAGCATGGCTACAGGGATGGGGTGGCCCACAGGCCAGCACCTG
AGGAGGCTCCAGCAGAAGAGGCACCTCCCAAGGAGGGTTTACCTGAGGCCTAGTGGCCTG
GAGCTGGGGGTNGGGATGGGNNNGGAAGGAGANGGATNNGCNACCGGCCTGCCCGTGGGG
AGAGGTGACACTCTGCGATGCATCAGCATCAGGAAAGGCAAGAGCATCTAATCTTATCCC
TGTCGACAGCAGGGACCCTCCACCTGTACACAGGGGATAAAGCACCACGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCACGCGTCCGCCCACTCACCCAGACCTTGCCTGCAAAGCCAGCTCTCATACCCCCTCGC
CCACCCCCTCTTTGATCCCCGACAGCCCAACCTAAACCTCTGGGCCCAAGGATGCCACGA
AGTGCTGCTGGGGCACCTGCAGGGGCTGGCGAGCACACTGGGCAACATGCTGGCTGTCAC
CTTCCTGCTGCAGACACTGGTGCTCCTGGGCCTGCGGTACCTGCAGACGGCCCTGGAGGG
GCTCGGAGGAATCATCGATGGGGAGGAAGAGGCCCAGGGCTATCTCTTTCCCGGTGGGCT
GAAAGACATGCTGAAAACAGCATGGCTACAGGGATGGGGTGGCCCACAGGCCAGCACCTG
AGGAGGCTCCAGCAGAAGAGGCACCTCCCAAGGAGGGTTTACCTGAGGCCTAGTGGCCTG
GAGCTGGGGGTNGGGATGGGNNNGGAAGGAGANGGATNNGCNACCGGCCTGCCCGTGGGG
AGAGGTGACACTCTGCGATGCATCAGCATCAGGAAAGGCAAGAGCATCTAATCTTATCCC
TGTCGACAGCAGGGACCCTCCACCTGTACACAGGGGATAAAGCACCACGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               Q95M84_HORSE

Coded protein: 1 entry(ies)

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Protein identifier


               
               Q95M84_HORSE

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               230-463, + strand, RNAz p=0.992099

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               230-463, + strand, RNAz p=0.992099

Homologous human UTR: 1 entry(ies)

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Homologous human UTR: 1 entry(ies)

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               3' of NM_000327, +

Homologous human UTR: 1 entry(ies)

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Human gene identifier and UTR site,
human gene reading direction


               
               3' of NM_000327, +

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               191-463, gnl|bosTau2|chr29 (32063203-32063470)
               

               
               191-463, gnl|Hg17|chr11 (62138666-62138928)
               

               
               191-463, gnl|Mm7|chr19 (8608052-8607790)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               191-463, gnl|bosTau2|chr29 (32063203-32063470)
               

               
               191-463, gnl|Hg17|chr11 (62138666-62138928)
               

               
               191-463, gnl|Mm7|chr19 (8608052-8607790)

	191-463, gnl\|bosTau2\|chr29 (32063203-32063470)
	191-463, gnl\|Hg17\|chr11 (62138666-62138928)
	191-463, gnl\|Mm7\|chr19 (8608052-8607790)