Non-Coding RNA Search

Mus1-POSM0100014_F04F

Sequence:


               
               AGGCAATTGACATGCGGCTCCAGCCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGG
CCATCGACCCCCATAGCAACATCCGGAACATGGTGGCGGTGCAGGAAGTCATCTCCAGCC
TGGAGAAATACCCCATTACCAAAGAGGCACTGGAGGAAACTCGACTTGGGAAGCTCATCA
ACGATGTCCGCAAGAAGACGAAGAATGAGGAGCTTGCCAAGCGGGCCAAGAAGCTGCTGC
GGAGCTGGCAGAAGCTCATCGAGCCCGTGCACCAGAATGAGGCCACACTGCGGGGGCTGG
CAAGCGCCACTGGCTCAGCCAATGGGGGTGCCCATAACTGTCGGCCAGAGGCAGGGGCAG
CTGGCCCACCCAAGAGCATCCACGACCTGAAGAACCGCAACGACATCCAGATGCTGCCCG
GGCAGCGGCTGGACAGGCTGGGTAGCCGCAAGCGCCGGGGAGACCAGCGTGACCTTGGCC
ACCCTGTGCCACCTCCCAAGGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGGCAATTGACATGCGGCTCCAGCCGTCTCCGCAGCAGATCAGGGACCGGCTGCTGCAGG
CCATCGACCCCCATAGCAACATCCGGAACATGGTGGCGGTGCAGGAAGTCATCTCCAGCC
TGGAGAAATACCCCATTACCAAAGAGGCACTGGAGGAAACTCGACTTGGGAAGCTCATCA
ACGATGTCCGCAAGAAGACGAAGAATGAGGAGCTTGCCAAGCGGGCCAAGAAGCTGCTGC
GGAGCTGGCAGAAGCTCATCGAGCCCGTGCACCAGAATGAGGCCACACTGCGGGGGCTGG
CAAGCGCCACTGGCTCAGCCAATGGGGGTGCCCATAACTGTCGGCCAGAGGCAGGGGCAG
CTGGCCCACCCAAGAGCATCCACGACCTGAAGAACCGCAACGACATCCAGATGCTGCCCG
GGCAGCGGCTGGACAGGCTGGGTAGCCGCAAGCGCCGGGGAGACCAGCGTGACCTTGGCC
ACCCTGTGCCACCTCCCAAGGTC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               150-269, - strand, RNAz p=0.946947

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               150-269, - strand, RNAz p=0.946947

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               150-503, gnl|bosTau2|chr7 (5834444-5834091)
               

               
               150-503, gnl|Hg17|chr19 (16549499-16549146)
               

               
               150-503, gnl|Mm7|chr8 (71020218-71019866)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               150-503, gnl|bosTau2|chr7 (5834444-5834091)
               

               
               150-503, gnl|Hg17|chr19 (16549499-16549146)
               

               
               150-503, gnl|Mm7|chr8 (71020218-71019866)

	150-503, gnl\|bosTau2\|chr7 (5834444-5834091)
	150-503, gnl\|Hg17\|chr19 (16549499-16549146)
	150-503, gnl\|Mm7\|chr8 (71020218-71019866)