Non-Coding RNA Search

OvF1-UMC-pd12fol-014-f01

Sequence:


               
               AAAGGATTTCAGGAAGATTTTTTTTTCTTTTTTCAATTGACATTTAATTCTGTTGGTCTA
TTTTGTAATTACTGCCGAATCAGAAACAGTGGAATGGATTGATGTAGTTTTAGCCTAGCT
CTTCCAGATGTAAAGTCAGTAGTCTATTATGTATTATCCCTGTTATTAAGTGTTGCTATG
TGATTGATACTTACTGAGAGATCTTTATTCTAAAACCGACTTTTTATGCTGAGTTAATAT
GTAGTATGGTTGGGTATCTGATTACAGCATGTATTTTGGTACAGGATAGCTGCCTTAGTA
TTTAAAATGTCCTAAAGGAAGATACTTATTTCAGGAATTAAATGTTATAATAGAGGAATT
TAGTGACAGGCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAGGATTTCAGGAAGATTTTTTTTTCTTTTTTCAATTGACATTTAATTCTGTTGGTCTA
TTTTGTAATTACTGCCGAATCAGAAACAGTGGAATGGATTGATGTAGTTTTAGCCTAGCT
CTTCCAGATGTAAAGTCAGTAGTCTATTATGTATTATCCCTGTTATTAAGTGTTGCTATG
TGATTGATACTTACTGAGAGATCTTTATTCTAAAACCGACTTTTTATGCTGAGTTAATAT
GTAGTATGGTTGGGTATCTGATTACAGCATGTATTTTGGTACAGGATAGCTGCCTTAGTA
TTTAAAATGTCCTAAAGGAAGATACTTATTTCAGGAATTAAATGTTATAATAGAGGAATT
TAGTGACAGGCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               238-372, + strand, RNAz p=0.962497

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               238-372, + strand, RNAz p=0.962497

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-372, gnl|bosTau2|chr18 (33321684-33321316)
               

               
               1-372, gnl|Hg17|chr19 (35152488-35152857)
               

               
               1-372, gnl|Mm7|chr7 (34889319-34888949)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-372, gnl|bosTau2|chr18 (33321684-33321316)
               

               
               1-372, gnl|Hg17|chr19 (35152488-35152857)
               

               
               1-372, gnl|Mm7|chr7 (34889319-34888949)

	1-372, gnl\|bosTau2\|chr18 (33321684-33321316)
	1-372, gnl\|Hg17\|chr19 (35152488-35152857)
	1-372, gnl\|Mm7\|chr7 (34889319-34888949)