OvF2-UMC-p2mm4-007-d09
|
TGCTGTTGTATCTTTTCCAGATGACAGCCTCACCCCGCACCCTCAGCTTGCCTGCTCATC
TCACAGAGACGGGCCCCGATCCCCTCTCTTCCGATGAGCTTGGGCAATGATTGGGATAAT
TTAGGACTTGCACCGCGTGATCATCTGTACAGTTACAACAAATAAAACATTTTAATATGA
GCAGTCACTGCGTGTTTACTGTATCATATTGCTGAGAGCTGAACAGATGCCAAACGCTAT
AACACAAGGGGGATATGAACTCCAGAATGATGACACTAATAAGGAAATTACAAAAGGCCC
AACAAATGGCATTTGTGTTAAATCAATAATGCTCGGTTTGTTTTTTTTAATTCTAATCTT
TCCTCG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TGCTGTTGTATCTTTTCCAGATGACAGCCTCACCCCGCACCCTCAGCTTGCCTGCTCATC
TCACAGAGACGGGCCCCGATCCCCTCTCTTCCGATGAGCTTGGGCAATGATTGGGATAAT
TTAGGACTTGCACCGCGTGATCATCTGTACAGTTACAACAAATAAAACATTTTAATATGA
GCAGTCACTGCGTGTTTACTGTATCATATTGCTGAGAGCTGAACAGATGCCAAACGCTAT
AACACAAGGGGGATATGAACTCCAGAATGATGACACTAATAAGGAAATTACAAAAGGCCC
AACAAATGGCATTTGTGTTAAATCAATAATGCTCGGTTTGTTTTTTTTAATTCTAATCTT
TCCTCG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
3-365, gnl|bosTau2|chr13 (62082974-62083337) |
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3-365, gnl|canFam2|chr24 (42274061-42274803) |
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3-365, gnl|dasNov1|scaffold_139 (149729-150466) |
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3-365, gnl|echTel1|scaffold_308044 (1390-540) |
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3-365, gnl|galGal2|chr20 (12136875-12136130) |
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3-365, gnl|hg17|chr20 (51458785-51459533) |
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3-365, gnl|Hg17|chr20 (51458846-51459209) |
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3-365, gnl|mm7|chr2 (169810206-169810967) |
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3-365, gnl|Mm7|chr2 (169810272-169810636) |
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3-365, gnl|monDom2|scaffold_1 (165635996-165636724) |
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3-365, gnl|oryCun1|scaffold_178763 (123158-122402) |
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3-365, gnl|panTro1|chr21 (54230974-54231722) |
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3-365, gnl|rheMac2|chr10 (11057708-11056942) |
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3-365, gnl|rn3|chr3 (160958328-160959060) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
3-365, gnl|bosTau2|chr13 (62082974-62083337) |
|
3-365, gnl|canFam2|chr24 (42274061-42274803) |
|
3-365, gnl|dasNov1|scaffold_139 (149729-150466) |
|
3-365, gnl|echTel1|scaffold_308044 (1390-540) |
|
3-365, gnl|galGal2|chr20 (12136875-12136130) |
|
3-365, gnl|hg17|chr20 (51458785-51459533) |
|
3-365, gnl|Hg17|chr20 (51458846-51459209) |
|
3-365, gnl|mm7|chr2 (169810206-169810967) |
|
3-365, gnl|Mm7|chr2 (169810272-169810636) |
|
3-365, gnl|monDom2|scaffold_1 (165635996-165636724) |
|
3-365, gnl|oryCun1|scaffold_178763 (123158-122402) |
|
3-365, gnl|panTro1|chr21 (54230974-54231722) |
|
3-365, gnl|rheMac2|chr10 (11057708-11056942) |
|
3-365, gnl|rn3|chr3 (160958328-160959060) |
