Non-Coding RNA Search

OvF2-UMC-pd0fol-003-b06

Sequence:


               
               TAAGTATTTGTAAAATTAGAAAAATGGCTTTTATCTCTTGAAAACTTGTCACATGCTTAG
TTTGAAGTTTTACACTCCAGATGTTTTTGAGTTGCATGAAAATATTGCATTAATGATGCA
AAAAAGTTAAATTTTCACGAGACTCAAAAATTTCTGAATGATATAACTTGGACTTTCCAT
ACATCCATATATCCTTGAGCTGAAATTAAGCAGGGAATTTCAGCTCTAAACACATTTTTT
GAGACAGTTATCTGTGAGTGAAAACAGGGTATTATAACAAAAGATGAGTTTAAATCTTAA
CTATAGTGTTTGTTACTGTGAATGCTATAATAATACATAAGTAAAATGAGTGTAAATGTA
ATATATTATTTTATACTGCTGTATACACATGAAATAAATAAAACTAGGATCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAGTATTTGTAAAATTAGAAAAATGGCTTTTATCTCTTGAAAACTTGTCACATGCTTAG
TTTGAAGTTTTACACTCCAGATGTTTTTGAGTTGCATGAAAATATTGCATTAATGATGCA
AAAAAGTTAAATTTTCACGAGACTCAAAAATTTCTGAATGATATAACTTGGACTTTCCAT
ACATCCATATATCCTTGAGCTGAAATTAAGCAGGGAATTTCAGCTCTAAACACATTTTTT
GAGACAGTTATCTGTGAGTGAAAACAGGGTATTATAACAAAAGATGAGTTTAAATCTTAA
CTATAGTGTTTGTTACTGTGAATGCTATAATAATACATAAGTAAAATGAGTGTAAATGTA
ATATATTATTTTATACTGCTGTATACACATGAAATAAATAAAACTAGGATCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               79-314, + strand, RNAz p=0.900945

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               79-314, + strand, RNAz p=0.900945

Predicted microRNA(s): 1 entry(ies)

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Predicted microRNA(s): 1 entry(ies)

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               79-161, + strand, RNAmicro p=0.94082

Predicted microRNA(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro


               
               79-161, + strand, RNAmicro p=0.94082

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-410, gnl|bosTau2|chr12 (24788566-24788155)
               

               
               1-410, gnl|Hg17|chr4 (134472952-134473362)
               

               
               1-410, gnl|Mm7|chr3 (45366377-45366784)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-410, gnl|bosTau2|chr12 (24788566-24788155)
               

               
               1-410, gnl|Hg17|chr4 (134472952-134473362)
               

               
               1-410, gnl|Mm7|chr3 (45366377-45366784)

	1-410, gnl\|bosTau2\|chr12 (24788566-24788155)
	1-410, gnl\|Hg17\|chr4 (134472952-134473362)
	1-410, gnl\|Mm7\|chr3 (45366377-45366784)