Non-Coding RNA Search

OvF6-UMC-p6mm1-003-h10

Sequence:


               
               AAAACAGACATAAAGCTACCAGTCGGAAAACGAAAGAAATAGAGCAAGTGAAACCAAAAA
TGATGTTCTTGGTGTTTTTCTATAATGTAGTCTTGTTAGCTTTTTTGTTACTGTAACAAT
GCTGATCTCGAACTGTACCAAAATACATGGAGACTTACAAACAGAACCACATGGAACTTT
CAAACTGAAAAAAACAAAATTTGTCACAAAAACTTTGTTGTCATAGTTAAGTTGATTGTA
GATGGTAATTGAATATACTCCTTTGAAAATATTTCATCAAGTATGTTTCCTGCTCATTGT
GATACATTAAAAAAAAATATGAGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAAACAGACATAAAGCTACCAGTCGGAAAACGAAAGAAATAGAGCAAGTGAAACCAAAAA
TGATGTTCTTGGTGTTTTTCTATAATGTAGTCTTGTTAGCTTTTTTGTTACTGTAACAAT
GCTGATCTCGAACTGTACCAAAATACATGGAGACTTACAAACAGAACCACATGGAACTTT
CAAACTGAAAAAAACAAAATTTGTCACAAAAACTTTGTTGTCATAGTTAAGTTGATTGTA
GATGGTAATTGAATATACTCCTTTGAAAATATTTCATCAAGTATGTTTCCTGCTCATTGT
GATACATTAAAAAAAAATATGAGC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               126-233, + strand, RNAz p=0.512081

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               126-233, + strand, RNAz p=0.512081

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               27-324, gnl|bosTau2|chr18 (33595625-33595912)
               

               
               27-324, gnl|Hg17|chr16 (71374584-71374289)
               

               
               27-324, gnl|Mm7|chr8 (107561418-107561779)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-324, gnl|bosTau2|chr18 (33595625-33595912)
               

               
               27-324, gnl|Hg17|chr16 (71374584-71374289)
               

               
               27-324, gnl|Mm7|chr8 (107561418-107561779)

	27-324, gnl\|bosTau2\|chr18 (33595625-33595912)
	27-324, gnl\|Hg17\|chr16 (71374584-71374289)
	27-324, gnl\|Mm7\|chr8 (107561418-107561779)