Non-Coding RNA Search

OvF6-UMC-p6mm2-002-h03

Sequence:


               
               TTGTTAACAGGGCGTCAGGTATATTAGTTAAATGTATTTCCTTTACGTGTGTTACTTAAC
TGTTTTTGTATCCTGTAACAACCAGTATTCATGATCTTTGGTGTGGAGCATGTATTTTTT
TATTCCAGTTCAGACAAGCCACATAGTGTAGTTTGGTTAAAATAATAATTCAGTTAACCT
TCCTTGAAATCCTGGCAAGAGGGCAGACGGGTGGGGGGGGAACCTTTGCAGATAATCAAG
GTGAACTCCTCCCTGGAGGCGAGGCCTCCATGGCTACAGATAGAGGACATTGTAACAGTG
GTGAAGTTGTGTTGAAGAGATCCTTGACCTAAATAAAGTGAGATGAAAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGTTAACAGGGCGTCAGGTATATTAGTTAAATGTATTTCCTTTACGTGTGTTACTTAAC
TGTTTTTGTATCCTGTAACAACCAGTATTCATGATCTTTGGTGTGGAGCATGTATTTTTT
TATTCCAGTTCAGACAAGCCACATAGTGTAGTTTGGTTAAAATAATAATTCAGTTAACCT
TCCTTGAAATCCTGGCAAGAGGGCAGACGGGTGGGGGGGGAACCTTTGCAGATAATCAAG
GTGAACTCCTCCCTGGAGGCGAGGCCTCCATGGCTACAGATAGAGGACATTGTAACAGTG
GTGAAGTTGTGTTGAAGAGATCCTTGACCTAAATAAAGTGAGATGAAAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               199-331, + strand, RNAz p=0.981812

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               199-331, + strand, RNAz p=0.981812

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-349, gnl|bosTau2|chr16 (19176049-19176374)
               

               
               1-349, gnl|Hg17|chr21 (34369535-34369877)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-349, gnl|bosTau2|chr16 (19176049-19176374)
               

               
               1-349, gnl|Hg17|chr21 (34369535-34369877)

	1-349, gnl\|bosTau2\|chr16 (19176049-19176374)
	1-349, gnl\|Hg17\|chr21 (34369535-34369877)