Non-Coding RNA Search

Ova1-OVR010018G09

Sequence:


               
               CCTCGTAGCCCTGCCTGGCCCAGCTGGATAGACTAGAGTCCCTGGTTTGGCTAGTACTTC
TGCTCTCTTTGGCCAGGGCAAGTGATGGTGAACCAAACTGGGCCGAGAGTTCTGCATTCA
GGTCTGAGCTGCACTCTCTGGGCCTCCATTTTTCCGCCTGTGTGTCGGTGAGGGGGGAGC
CCCTGTGGGGGTACAATGTGTTCCTGTGAGATTAGCACCACCCTTAGTTGACACATCACC
AGGGATGAGGGAATGATTTTGTAACGAGTGTGGGTTTTATGGAAGTATTTCCAGATGCCA
ACTTTGCCTTTGGTGTTGCTGTTAAACAGAATAGGAAGAGTGGAACCTGCAGTCACATAT
GGGCGAATGAATAACCAGTAACTCAGAGTGTCTTTATCTTGGACGTTTCTTCCCATGATG
AGTGTGTTTTTTAAAAAGCATTTCCCCTGATAACAGGCCTGGCTTACAGGGCTTCCACGC
CTTGTGAGAGAAATAGGGTGTTTCCAGGGTGCGATAAACCAGTGGCCTTCATTCATTCCT
CCTTGTTTGCACAGCAGACACAGTGCTATATATACATTCTCGGCAGGTTCTTAAGCCAAA
ACTTAGAAAAATTGCTTTCCTTTAGGAAAACTGAAATTTTGGAGGGGAGGGGTGGAAATA
TATGTTGGGGTTAACTTCTGTTCATTTTCTTAGATATGATGTCACTTAAGGCATTTGAGG
TGCGGGAAAAGCATTGCACATGTCCTCTTTGCTCCTAAAAAGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCTCGTAGCCCTGCCTGGCCCAGCTGGATAGACTAGAGTCCCTGGTTTGGCTAGTACTTC
TGCTCTCTTTGGCCAGGGCAAGTGATGGTGAACCAAACTGGGCCGAGAGTTCTGCATTCA
GGTCTGAGCTGCACTCTCTGGGCCTCCATTTTTCCGCCTGTGTGTCGGTGAGGGGGGAGC
CCCTGTGGGGGTACAATGTGTTCCTGTGAGATTAGCACCACCCTTAGTTGACACATCACC
AGGGATGAGGGAATGATTTTGTAACGAGTGTGGGTTTTATGGAAGTATTTCCAGATGCCA
ACTTTGCCTTTGGTGTTGCTGTTAAACAGAATAGGAAGAGTGGAACCTGCAGTCACATAT
GGGCGAATGAATAACCAGTAACTCAGAGTGTCTTTATCTTGGACGTTTCTTCCCATGATG
AGTGTGTTTTTTAAAAAGCATTTCCCCTGATAACAGGCCTGGCTTACAGGGCTTCCACGC
CTTGTGAGAGAAATAGGGTGTTTCCAGGGTGCGATAAACCAGTGGCCTTCATTCATTCCT
CCTTGTTTGCACAGCAGACACAGTGCTATATATACATTCTCGGCAGGTTCTTAAGCCAAA
ACTTAGAAAAATTGCTTTCCTTTAGGAAAACTGAAATTTTGGAGGGGAGGGGTGGAAATA
TATGTTGGGGTTAACTTCTGTTCATTTTCTTAGATATGATGTCACTTAAGGCATTTGAGG
TGCGGGAAAAGCATTGCACATGTCCTCTTTGCTCCTAAAAAGG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-159, + strand, RNAz p=0.992957

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-159, + strand, RNAz p=0.992957

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-761, gnl|bosTau2|chr8 (56375785-56375034)
               

               
               1-761, gnl|Hg17|chr9 (113771421-113772144)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-761, gnl|bosTau2|chr8 (56375785-56375034)
               

               
               1-761, gnl|Hg17|chr9 (113771421-113772144)

	1-761, gnl\|bosTau2\|chr8 (56375785-56375034)
	1-761, gnl\|Hg17\|chr9 (113771421-113772144)