Ova1-OVR010027C12
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGGAAGATGGCGGCCCCCAGGGACGAACCTGGATCCGTGGAGGCAGAGGGCAGCTCCGGT CGCCAGGGGAGCTCGGGAGTCAAGGTGGTGCTTCCCTCCGATCTAGCCACCCCCGCCCCG CTGTGTCCTCACGGACCCACTCTTCTGTTTGTAAAGGTGAACCAAGGGAAAGAAGAAACA CGGAGATTTTATGCCTGCTCAGCTTGTAGAGATAGAAAAGATTGTAATTTTTTTCAATGG GAAGATGAGAAGTTGTCCGAAGCCAGACTTGCTGCCCGAGAAGCTCACAACCAAAAATGT CAGCCCCCTTTATCCCGATCGCAGTGTGTGGAAAGGTACTTGAAGTTTACTGAGTTGCCC TTGTCTCAGAGAAGGTTCTGTCAAGGATGTCAGCAGTTGCTGCTGCCAGACGATGGGGAG CAGCATCGTGAGCATCAGGTCGTGGGTGACATTTCTATCACCCAGTTAAAAAGGCCCAGT CAACTCCTTCATCCCCTGGAAAACAAGAAGACAAATGCCCAGTATTTGTTTACTGATAGG AGCTGTCTGTTCTTGGTAGACCTGCTCTCTGCCCTCGGCTTCAGGAGAGTCCTGTGTGTG GGGACGCCAAGGTTGCATGAGCTGATCAGGTTGAAAGCATCAGGGGACAAGAAGTCTAAC ATTAAAAGCCTTTTATTGGATATTGACTTTCGGTATTCACAGTTTTATATGGAAGACAGT TTTTGCCATTATAACATGTTTAACCATCACTTCTTCGATGGAAAGGTAAGAATTAATAAC CATGTCTCTTTCTTCTTTTATTGTATTTCCGCCCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGGAAGATGGCGGCCCCCAGGGACGAACCTGGATCCGTGGAGGCAGAGGGCAGCTCCGGT CGCCAGGGGAGCTCGGGAGTCAAGGTGGTGCTTCCCTCCGATCTAGCCACCCCCGCCCCG CTGTGTCCTCACGGACCCACTCTTCTGTTTGTAAAGGTGAACCAAGGGAAAGAAGAAACA CGGAGATTTTATGCCTGCTCAGCTTGTAGAGATAGAAAAGATTGTAATTTTTTTCAATGG GAAGATGAGAAGTTGTCCGAAGCCAGACTTGCTGCCCGAGAAGCTCACAACCAAAAATGT CAGCCCCCTTTATCCCGATCGCAGTGTGTGGAAAGGTACTTGAAGTTTACTGAGTTGCCC TTGTCTCAGAGAAGGTTCTGTCAAGGATGTCAGCAGTTGCTGCTGCCAGACGATGGGGAG CAGCATCGTGAGCATCAGGTCGTGGGTGACATTTCTATCACCCAGTTAAAAAGGCCCAGT CAACTCCTTCATCCCCTGGAAAACAAGAAGACAAATGCCCAGTATTTGTTTACTGATAGG AGCTGTCTGTTCTTGGTAGACCTGCTCTCTGCCCTCGGCTTCAGGAGAGTCCTGTGTGTG GGGACGCCAAGGTTGCATGAGCTGATCAGGTTGAAAGCATCAGGGGACAAGAAGTCTAAC ATTAAAAGCCTTTTATTGGATATTGACTTTCGGTATTCACAGTTTTATATGGAAGACAGT TTTTGCCATTATAACATGTTTAACCATCACTTCTTCGATGGAAAGGTAAGAATTAATAAC CATGTCTCTTTCTTCTTTTATTGTATTTCCGCCCTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 333-531, + strand, RNAz p=0.985766 | |
| 692-810, + strand, RNAz p=0.920181 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 333-531, + strand, RNAz p=0.985766 | |
| 692-810, + strand, RNAz p=0.920181 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 133-252, gnl|bosTau2|chr6 (21699414-21699295) | |
| 133-252, gnl|canFam2|chr3 (87788184-87788048) | |
| 133-252, gnl|danRer3|chrNA (182042463-182042337) | |
| 133-252, gnl|dasNov1|scaffold_25671 (702-562) | |
| 133-252, gnl|echTel1|scaffold_50938 (2650-2785) | |
| 133-252, gnl|fr1|chrUn (223250822-223250702) | |
| 133-252, gnl|galGal2|chr4 (73712432-73712299) | |
| 133-252, gnl|hg17|chr4 (24991923-24992059) | |
| 133-252, gnl|Hg17|chr4 (24991936-24992055) | |
| 133-252, gnl|loxAfr1|scaffold_14190 (54036-54171) | |
| 133-252, gnl|mm7|chr5 (52157282-52157418) | |
| 133-252, gnl|Mm7|chr5 (52157295-52157414) | |
| 133-252, gnl|monDom2|scaffold_10 (13478187-13478058) | |
| 133-252, gnl|panTro1|chr3 (25566765-25566901) | |
| 133-252, gnl|rheMac2|chr5 (20073884-20074020) | |
| 133-252, gnl|rn3|chr14 (62962205-62962069) | |
| 133-252, gnl|tetNig1|chrUn_random (127750876-127750998) | |
| 133-252, gnl|xenTro1|scaffold_536 (516254-516129) | |
| 333-613, gnl|bosTau2|chr6 (21684739-21684459) | |
| 333-613, gnl|Hg17|chr4 (25011071-25011351) | |
| 333-613, gnl|Mm7|chr5 (52169281-52169561) | |
| 692-810, gnl|bosTau2|chr6 (21674747-21674629) | |
| 692-810, gnl|canFam2|chr3 (87765743-87765617) | |
| 692-810, gnl|danRer3|chrNA (182029640-182029557) | |
| 692-810, gnl|dasNov1|scaffold_50212 (7883-8020) | |
| 692-810, gnl|echTel1|scaffold_116915 (316-180) | |
| 692-810, gnl|fr1|chrUn (223247466-223247336) | |
| 692-810, gnl|galGal2|chr4 (73709708-73709604) | |
| 692-810, gnl|hg17|chr4 (25023421-25023548) | |
| 692-810, gnl|Hg17|chr4 (25023438-25023576) | |
| 692-810, gnl|mm7|chr5 (52177664-52177796) | |
| 692-810, gnl|Mm7|chr5 (52177685-52177833) | |
| 692-810, gnl|monDom2|scaffold_10 (13456883-13456763) | |
| 692-810, gnl|oryCun1|scaffold_136357 (7769-7901) | |
| 692-810, gnl|panTro1|chr3 (25598573-25598700) | |
| 692-810, gnl|rheMac2|chr5 (20104456-20104583) | |
| 692-810, gnl|rn3|chr14 (62941508-62941377) | |
| 692-810, gnl|tetNig1|chrUn_random (127752459-127752563) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 133-252, gnl|bosTau2|chr6 (21699414-21699295) | |
| 133-252, gnl|canFam2|chr3 (87788184-87788048) | |
| 133-252, gnl|danRer3|chrNA (182042463-182042337) | |
| 133-252, gnl|dasNov1|scaffold_25671 (702-562) | |
| 133-252, gnl|echTel1|scaffold_50938 (2650-2785) | |
| 133-252, gnl|fr1|chrUn (223250822-223250702) | |
| 133-252, gnl|galGal2|chr4 (73712432-73712299) | |
| 133-252, gnl|hg17|chr4 (24991923-24992059) | |
| 133-252, gnl|Hg17|chr4 (24991936-24992055) | |
| 133-252, gnl|loxAfr1|scaffold_14190 (54036-54171) | |
| 133-252, gnl|mm7|chr5 (52157282-52157418) | |
| 133-252, gnl|Mm7|chr5 (52157295-52157414) | |
| 133-252, gnl|monDom2|scaffold_10 (13478187-13478058) | |
| 133-252, gnl|panTro1|chr3 (25566765-25566901) | |
| 133-252, gnl|rheMac2|chr5 (20073884-20074020) | |
| 133-252, gnl|rn3|chr14 (62962205-62962069) | |
| 133-252, gnl|tetNig1|chrUn_random (127750876-127750998) | |
| 133-252, gnl|xenTro1|scaffold_536 (516254-516129) | |
| 333-613, gnl|bosTau2|chr6 (21684739-21684459) | |
| 333-613, gnl|Hg17|chr4 (25011071-25011351) | |
| 333-613, gnl|Mm7|chr5 (52169281-52169561) | |
| 692-810, gnl|bosTau2|chr6 (21674747-21674629) | |
| 692-810, gnl|canFam2|chr3 (87765743-87765617) | |
| 692-810, gnl|danRer3|chrNA (182029640-182029557) | |
| 692-810, gnl|dasNov1|scaffold_50212 (7883-8020) | |
| 692-810, gnl|echTel1|scaffold_116915 (316-180) | |
| 692-810, gnl|fr1|chrUn (223247466-223247336) | |
| 692-810, gnl|galGal2|chr4 (73709708-73709604) | |
| 692-810, gnl|hg17|chr4 (25023421-25023548) | |
| 692-810, gnl|Hg17|chr4 (25023438-25023576) | |
| 692-810, gnl|mm7|chr5 (52177664-52177796) | |
| 692-810, gnl|Mm7|chr5 (52177685-52177833) | |
| 692-810, gnl|monDom2|scaffold_10 (13456883-13456763) | |
| 692-810, gnl|oryCun1|scaffold_136357 (7769-7901) | |
| 692-810, gnl|panTro1|chr3 (25598573-25598700) | |
| 692-810, gnl|rheMac2|chr5 (20104456-20104583) | |
| 692-810, gnl|rn3|chr14 (62941508-62941377) | |
| 692-810, gnl|tetNig1|chrUn_random (127752459-127752563) |