Non-Coding RNA Search

Ova1-OVR010028B05

Sequence:


               
               TGTCATTTTGCTGAGACAAGGGTTTGATGAGGATGGGGCATAGCTGGTGGGTAAACCTTG
CTGACTCCCAGGTTCCGTGCTTCAGTTCATGGTCCTCAGAAACAGGGGGAGGAAGAGGTC
ACTGGGCCTTCTCCTGCACAACACTGAAGGCCAGCTGCCACACTGTCCCCCCTTGGCTTT
AGAGAAGGGAAAAACCCTTTCCTCCTAGGGCTCGTATTTCTCTCTTTTCCGAAAGAGACT
TTTATTTTAAACATCGCAGAAAGCCCCCAAGTCCTCAGCAACTCACCTCCTCCCTCCCGC
CGCCCCAGCACAGATCCTGCTGAAATGTGGAACCCCGAGCTACCCTAGGTCCTGCTGCAG
CACCTCCAGTCACGTGGGATGGGAGCTGGAGTTGAAGTTTGGGCAACTTTGAATTATTAC
AGTTACCCGGATATATGATGTTTTTTTCTACTCTGTCTAAAGAAGGACGGAAGGGTCCTG
ACCCTTCCACACCCCCTCCCTCTCCCAAATGAATTTCTCGTTTGTTCCAGGGGCTAGATT
GACAGCTTAGGAGACTGAGACCTTCTGTCTCCACCTGGGCAGGTGGGCCGTGACTTTGGG
GAGTGAGCGCAGACCACCTTTGAGGGCGAAAGAGGAGGTCGTTTGAGGGCGCTCTTCCTT
TGCCCTATTGTTTCCGGCTTGCTTTGGGGTTTATTTTGTTGGGGGCAGGGAGGGTGGCAC
GTGTGGCAGCCCTTGCCTGTCCACTCTGAGTTGCCGTCCTTTTTTCCGTAAGTAATACCC
A

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTCATTTTGCTGAGACAAGGGTTTGATGAGGATGGGGCATAGCTGGTGGGTAAACCTTG
CTGACTCCCAGGTTCCGTGCTTCAGTTCATGGTCCTCAGAAACAGGGGGAGGAAGAGGTC
ACTGGGCCTTCTCCTGCACAACACTGAAGGCCAGCTGCCACACTGTCCCCCCTTGGCTTT
AGAGAAGGGAAAAACCCTTTCCTCCTAGGGCTCGTATTTCTCTCTTTTCCGAAAGAGACT
TTTATTTTAAACATCGCAGAAAGCCCCCAAGTCCTCAGCAACTCACCTCCTCCCTCCCGC
CGCCCCAGCACAGATCCTGCTGAAATGTGGAACCCCGAGCTACCCTAGGTCCTGCTGCAG
CACCTCCAGTCACGTGGGATGGGAGCTGGAGTTGAAGTTTGGGCAACTTTGAATTATTAC
AGTTACCCGGATATATGATGTTTTTTTCTACTCTGTCTAAAGAAGGACGGAAGGGTCCTG
ACCCTTCCACACCCCCTCCCTCTCCCAAATGAATTTCTCGTTTGTTCCAGGGGCTAGATT
GACAGCTTAGGAGACTGAGACCTTCTGTCTCCACCTGGGCAGGTGGGCCGTGACTTTGGG
GAGTGAGCGCAGACCACCTTTGAGGGCGAAAGAGGAGGTCGTTTGAGGGCGCTCTTCCTT
TGCCCTATTGTTTCCGGCTTGCTTTGGGGTTTATTTTGTTGGGGGCAGGGAGGGTGGCAC
GTGTGGCAGCCCTTGCCTGTCCACTCTGAGTTGCCGTCCTTTTTTCCGTAAGTAATACCC
A

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               120-239, + strand, RNAz p=0.789765

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               120-239, + strand, RNAz p=0.789765

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               6-654, gnl|bosTau2|chr3 (55456354-55456981)
               

               
               6-654, gnl|Hg17|chr1 (64064201-64064904)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               6-654, gnl|bosTau2|chr3 (55456354-55456981)
               

               
               6-654, gnl|Hg17|chr1 (64064201-64064904)

	6-654, gnl\|bosTau2\|chr3 (55456354-55456981)
	6-654, gnl\|Hg17\|chr1 (64064201-64064904)