Ova1-OVR010030B03
|
TTCAGGATGTTCAGAAAGATGCTTCAGGGTGTGTCTGGCCCAGGCCTGCATCACAAGTCC
AGAACCTCTGATCCCTGCTAAGGCTGAGCTAGAACAAACAGCTCAGGAAGGCAACACAGA
AGAAAGCCCCAGGCTCTGGGAGAAGAAAATACTGTGCTGTGGTTGGACGCAGCCCAAACA
AGAGAGACAGAAATGAGAGGCGAGGGGATGAATGAAGAGGTCAGGCTTGTCCACAAGTGC
TGGTTCTAACCAGACGCCAGAAAAAAAATGGTTCCCAGGAGCCTGTGAGGGGAAGTGAGA
AGGAGAGGTGGGGCGGCTGGACTAGGGTGGGCCTGTGATACGGTTCTGTTGGGCTGAGAC
AAGATGCAACGGGACCCTAAGGGTCAGATTAACAGGGAGGGTTGGAAGGACTCCAAGGCC
ACTTGAAGGGGTGTAAAAGTAGCACAGGCAGCTCTGCCCAGCGCCCCCAACCAGCTGCAG
TGCAGAGAACAACGCTGCCAGGGTCAAGGCTGTTCATGGGGGCAATTCCTTCTTACAGAG
AAGTTGTTATAATGAAGCCTTGATTCTGTGGCCATATATGGCATGACCCTCTGTGCTGCA
TTGTCAAACTGTCAGGTCCTCTGTCTCCGTGCCAGGGCTGCAGTGATATTTGCTGCGGTG
AGTGGCAGATGTAGATTGGCCCATTTTGCTCAGCACTAGAGCCCTGTGAAACCACAGAAG
GTGAGATGGAAGCACCGTCTAGGAATAGCTGCCAGGAGACACCATGGAGCCTGGGCAGGT
GGCTGAGAGGCAGAAGCAGGCCTGTGGGTCCAGGCCAGAGGCAGATAAACAGATGCCCCG
TG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTCAGGATGTTCAGAAAGATGCTTCAGGGTGTGTCTGGCCCAGGCCTGCATCACAAGTCC
AGAACCTCTGATCCCTGCTAAGGCTGAGCTAGAACAAACAGCTCAGGAAGGCAACACAGA
AGAAAGCCCCAGGCTCTGGGAGAAGAAAATACTGTGCTGTGGTTGGACGCAGCCCAAACA
AGAGAGACAGAAATGAGAGGCGAGGGGATGAATGAAGAGGTCAGGCTTGTCCACAAGTGC
TGGTTCTAACCAGACGCCAGAAAAAAAATGGTTCCCAGGAGCCTGTGAGGGGAAGTGAGA
AGGAGAGGTGGGGCGGCTGGACTAGGGTGGGCCTGTGATACGGTTCTGTTGGGCTGAGAC
AAGATGCAACGGGACCCTAAGGGTCAGATTAACAGGGAGGGTTGGAAGGACTCCAAGGCC
ACTTGAAGGGGTGTAAAAGTAGCACAGGCAGCTCTGCCCAGCGCCCCCAACCAGCTGCAG
TGCAGAGAACAACGCTGCCAGGGTCAAGGCTGTTCATGGGGGCAATTCCTTCTTACAGAG
AAGTTGTTATAATGAAGCCTTGATTCTGTGGCCATATATGGCATGACCCTCTGTGCTGCA
TTGTCAAACTGTCAGGTCCTCTGTCTCCGTGCCAGGGCTGCAGTGATATTTGCTGCGGTG
AGTGGCAGATGTAGATTGGCCCATTTTGCTCAGCACTAGAGCCCTGTGAAACCACAGAAG
GTGAGATGGAAGCACCGTCTAGGAATAGCTGCCAGGAGACACCATGGAGCCTGGGCAGGT
GGCTGAGAGGCAGAAGCAGGCCTGTGGGTCCAGGCCAGAGGCAGATAAACAGATGCCCCG
TG
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
14-800, gnl|bosTau2|chr28 (33137481-33138257) |
|
14-800, gnl|canFam2|chr28 (5516435-5515490) |
|
14-800, gnl|dasNov1|scaffold_34442 (12076-12911) |
|
14-800, gnl|hg17|chr10 (44736002-44736899) |
|
14-800, gnl|Hg17|chr10 (44736404-44737145) |
|
14-800, gnl|panTro1|chr8 (45487125-45488028) |
|
14-800, gnl|rheMac2|chr9 (45092130-45093030) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
14-800, gnl|bosTau2|chr28 (33137481-33138257) |
|
14-800, gnl|canFam2|chr28 (5516435-5515490) |
|
14-800, gnl|dasNov1|scaffold_34442 (12076-12911) |
|
14-800, gnl|hg17|chr10 (44736002-44736899) |
|
14-800, gnl|Hg17|chr10 (44736404-44737145) |
|
14-800, gnl|panTro1|chr8 (45487125-45488028) |
|
14-800, gnl|rheMac2|chr9 (45092130-45093030) |
