Non-Coding RNA Search

Ova1-OVR010035H03

Sequence:


               
               AACAGAAATGTCCCAGAGCTGCGGTGTCACATATGGCACTTAACATGTGGTTAGGACAGG
TGAGGAACTGGATGTTTAATTTGCCTTGATTTTATTTAAAATTTTAATTAATTTACATTG
AAGCTGAATACCACGGCAGACTGTGCAGCTCTAGATAGTACTCGCTGAACTGTTCCACTG
AAATGCTCCTGGTGGTAGAGAAAAGAGAATGAATACCTTGATGGTTTGGGGGGCACGTTT
TCAAGTTCAGAATTACTTGGAAGTCTTAGCTTAAAAATGCACCATGACTGCATTGATCAC
ATGTATGGTTTTGAATATGTACCCTCTACCATGGAGCAAAACGGATGGGCCAGGAAGACG
TGTGCCTCCTGAGCATGTGGCGCCATAGCCTCTTGTGGGTTCCTGAATGCCGGCTGAGAC
AGGAGAGCACGTTGCGAGGAAGTTGGCTTGAGGTTTACACATCACATTTTTCCTATTTTG
AGTGCAGCCTGAGAATGAAAACATCTCATCCAACACCCATCCCGTGTTCGGAATGCCCTC
CTGCCTGACGTGGGTTAGAACCCTCTTGCTGCAATGCAAACCTCCCATTCGATTAAAAAT
TCTCCCCCAGAAAGCTCTTCAAGTGCATTTCGTGAATAAGGTGGTGTCTGTGACTTTCCG
TGACATTTACTCTAATAAGCCGTGGGAGTGATTTAGTGGTTAGTGGGCACTGACATTTGA
GGAAGGAAAGACAAACTTGGCCGCTTCTGACATGACTTTTTTTCTTCTCCCCTTGACTCA
TGGTCTTGGATCCATGGAAACTTTGTTTCCTGAGAGACATACTGTGTTCTCTGGGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACAGAAATGTCCCAGAGCTGCGGTGTCACATATGGCACTTAACATGTGGTTAGGACAGG
TGAGGAACTGGATGTTTAATTTGCCTTGATTTTATTTAAAATTTTAATTAATTTACATTG
AAGCTGAATACCACGGCAGACTGTGCAGCTCTAGATAGTACTCGCTGAACTGTTCCACTG
AAATGCTCCTGGTGGTAGAGAAAAGAGAATGAATACCTTGATGGTTTGGGGGGCACGTTT
TCAAGTTCAGAATTACTTGGAAGTCTTAGCTTAAAAATGCACCATGACTGCATTGATCAC
ATGTATGGTTTTGAATATGTACCCTCTACCATGGAGCAAAACGGATGGGCCAGGAAGACG
TGTGCCTCCTGAGCATGTGGCGCCATAGCCTCTTGTGGGTTCCTGAATGCCGGCTGAGAC
AGGAGAGCACGTTGCGAGGAAGTTGGCTTGAGGTTTACACATCACATTTTTCCTATTTTG
AGTGCAGCCTGAGAATGAAAACATCTCATCCAACACCCATCCCGTGTTCGGAATGCCCTC
CTGCCTGACGTGGGTTAGAACCCTCTTGCTGCAATGCAAACCTCCCATTCGATTAAAAAT
TCTCCCCCAGAAAGCTCTTCAAGTGCATTTCGTGAATAAGGTGGTGTCTGTGACTTTCCG
TGACATTTACTCTAATAAGCCGTGGGAGTGATTTAGTGGTTAGTGGGCACTGACATTTGA
GGAAGGAAAGACAAACTTGGCCGCTTCTGACATGACTTTTTTTCTTCTCCCCTTGACTCA
TGGTCTTGGATCCATGGAAACTTTGTTTCCTGAGAGACATACTGTGTTCTCTGGGTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               721-838, - strand, RNAz p=0.558639

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               721-838, - strand, RNAz p=0.558639

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               36-838, gnl|bosTau2|chr10 (24502281-24501468)
               

               
               36-838, gnl|Hg17|chrX (17256614-17259197)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-838, gnl|bosTau2|chr10 (24502281-24501468)
               

               
               36-838, gnl|Hg17|chrX (17256614-17259197)

	36-838, gnl\|bosTau2\|chr10 (24502281-24501468)
	36-838, gnl\|Hg17\|chrX (17256614-17259197)