Non-Coding RNA Search

Ova1-OVR010041G07

Sequence:


               
               CTTTAAACTGGATTTTCCAGACTGCGAGGTTAAAAAATCAATTTAGGAGTTTCCTAATGG
CTCCAAGGGagtgggttcaagatctggtgttgtcactgctgtggcttgggtcacttctgt
ggcgtgggttcaatacctggcccaggaacttctgcatgctgtgggcatACCCCCCTCCCC
CAAAAAATCAGTTTAGTACATGATGACCAGCATATTTTAATGGAGTAGAGTGGTGTAGAA
TACAAAGTATCAGGATGCAGAAAAGGGAAATTCTATTCCATGAAACTGTTTCTGGTTACA
CACACACACACACACACACACACACACAGTAGGTCACAATTAATTAAACTGTATTTCTTA
CATTGAGTAGTAGTCAAAAAGTTTGAAAACCATAGCTCTGTGGCATTCTGTTAGGTCAAC
TATGAATTTTTTTCAAATGAGACAAAGGCGTTAATTTTGTACTTGAGATAGAAAAATTAA
TCCTTCCTTTAGGAATGTACTTCACATGGTAACCTGTTAAATATTGTATTTGTTGATTCT
TAGGCTTTGCAATGAGCTTCTTTTCAAACCTTTAACTTCATTTCATTGATGTAGGGCCTT
TATTTTAACCATATTTTCATCTCTTTACTGAGATTTTAAATATCTTAGTTTATCTGTTAC
TCCATTCCAGAAGTAACTTTCATAAGTGATTCCTTTAAGTAGCAAACTCCTGGAGAGCTT
CATGAATTCAGCATGAATATGTTACGATGAAACTTTCTAGAGGTAACATGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTTAAACTGGATTTTCCAGACTGCGAGGTTAAAAAATCAATTTAGGAGTTTCCTAATGG
CTCCAAGGGagtgggttcaagatctggtgttgtcactgctgtggcttgggtcacttctgt
ggcgtgggttcaatacctggcccaggaacttctgcatgctgtgggcatACCCCCCTCCCC
CAAAAAATCAGTTTAGTACATGATGACCAGCATATTTTAATGGAGTAGAGTGGTGTAGAA
TACAAAGTATCAGGATGCAGAAAAGGGAAATTCTATTCCATGAAACTGTTTCTGGTTACA
CACACACACACACACACACACACACACAGTAGGTCACAATTAATTAAACTGTATTTCTTA
CATTGAGTAGTAGTCAAAAAGTTTGAAAACCATAGCTCTGTGGCATTCTGTTAGGTCAAC
TATGAATTTTTTTCAAATGAGACAAAGGCGTTAATTTTGTACTTGAGATAGAAAAATTAA
TCCTTCCTTTAGGAATGTACTTCACATGGTAACCTGTTAAATATTGTATTTGTTGATTCT
TAGGCTTTGCAATGAGCTTCTTTTCAAACCTTTAACTTCATTTCATTGATGTAGGGCCTT
TATTTTAACCATATTTTCATCTCTTTACTGAGATTTTAAATATCTTAGTTTATCTGTTAC
TCCATTCCAGAAGTAACTTTCATAAGTGATTCCTTTAAGTAGCAAACTCCTGGAGAGCTT
CATGAATTCAGCATGAATATGTTACGATGAAACTTTCTAGAGGTAACATGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               517-723, + strand, RNAz p=0.953917

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               517-723, + strand, RNAz p=0.953917

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               182-723, gnl|bosTau2|chr11 (53250467-53251005)
               

               
               182-723, gnl|Hg17|chr2 (24863363-24863916)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               182-723, gnl|bosTau2|chr11 (53250467-53251005)
               

               
               182-723, gnl|Hg17|chr2 (24863363-24863916)

	182-723, gnl\|bosTau2\|chr11 (53250467-53251005)
	182-723, gnl\|Hg17\|chr2 (24863363-24863916)