Non-Coding RNA Search

Ova1-OVRM10002G01

Sequence:


               
               TAAAGGGCCTACAAGGCAAGATTTTTAATTTAAAGTAGACCTTGTTCTTGTTCCAAAAAA
ATGTAAGTAATAAAAAGGACGAGGAAAAAGAGAGAAATTGGGTAACTCTTAAATAGTCGA
AGTACATTTCTTGAAAAGGTTGTTGATAATAATAATAGTAAACGTAAATTTCTTACTCTG
CGACAAGCCCTATTTTAAGTCATTTatgtagtaatttaattaatccttacaaaaccctat
gaggtagatattattattatccccgttttacagatgagggaactgaaaccaagagatgtt
aagaaacctcccccacttcacacgtcaaagtggtgaagccagggattatgggtataattg
tgtcccccaccccaaattcaagttgaagttataaccccaagcacctcagaccgtgatctt
tagaaatggagtcattgcagaattaattaagaagagatcatattggagtaaggtaagccc
ataatccactatgactggtatctttatgaaaagaggaaatttggagatagacacacacac
aAGATGCATGTGAAAATTGTCGTTAATGCTGCCACAAAGAAGGAACTATCAGAAGCTAGG
AGAGAAGCCTGGAAAAGACCCTTCCTAGTGCCTTNCAAGAGAGCATCGCTCTGTTGACAC
CTTCATCTCAGACTTAGAGACTCTAGAACTGTGAGGGGAATGTGTTTCTCTTGTTT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TAAAGGGCCTACAAGGCAAGATTTTTAATTTAAAGTAGACCTTGTTCTTGTTCCAAAAAA
ATGTAAGTAATAAAAAGGACGAGGAAAAAGAGAGAAATTGGGTAACTCTTAAATAGTCGA
AGTACATTTCTTGAAAAGGTTGTTGATAATAATAATAGTAAACGTAAATTTCTTACTCTG
CGACAAGCCCTATTTTAAGTCATTTatgtagtaatttaattaatccttacaaaaccctat
gaggtagatattattattatccccgttttacagatgagggaactgaaaccaagagatgtt
aagaaacctcccccacttcacacgtcaaagtggtgaagccagggattatgggtataattg
tgtcccccaccccaaattcaagttgaagttataaccccaagcacctcagaccgtgatctt
tagaaatggagtcattgcagaattaattaagaagagatcatattggagtaaggtaagccc
ataatccactatgactggtatctttatgaaaagaggaaatttggagatagacacacacac
aAGATGCATGTGAAAATTGTCGTTAATGCTGCCACAAAGAAGGAACTATCAGAAGCTAGG
AGAGAAGCCTGGAAAAGACCCTTCCTAGTGCCTTNCAAGAGAGCATCGCTCTGTTGACAC
CTTCATCTCAGACTTAGAGACTCTAGAACTGTGAGGGGAATGTGTTTCTCTTGTTT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               410-551, - strand, RNAz p=0.967892

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               410-551, - strand, RNAz p=0.967892

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               29-716, gnl|bosTau2|chr6 (4850130-4850824)
               

               
               29-716, gnl|Hg17|chr4 (113714839-113715530)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-716, gnl|bosTau2|chr6 (4850130-4850824)
               

               
               29-716, gnl|Hg17|chr4 (113714839-113715530)

	29-716, gnl\|bosTau2\|chr6 (4850130-4850824)
	29-716, gnl\|Hg17\|chr4 (113714839-113715530)