Non-Coding RNA Search

Ova1-OVRM10006E08

Sequence:


               
               ACTTGCGCCGAACATGGCCGCCGCCGCCGGCGCCGGTGCCGCCCGCCCGGCCGAGCCTGG
AACACAAGATTGAAAATGACAGCTCAAGACCTTACTGAGGAACTGTCCTGTGACATGGAG
TTGGAAGGATTTACGAGACAGGGTCCTCACTTCTCCATTTTAGATGACAGTTGGAATTGT
GAGAGCCAGGAGGGATGTTTGAAGCGATCAGCCTTAACTCATGAGGAACCAGGAGCTCAG
AAAGCAGTTCATGAATATCCTGGATTTGGGGAGCATTTGAGTGTGAGCCCAGACCTTCCA
CGATATCAAAGAGTTCCTACAACAAATGGTTTCTGTGTACATGGCTCATATGTTAAAAGT
CTGGATTGTGACCCAGCTTTACACAGTTGCCACAAAAGTTATGTAGCTAGGAGAACAGGT
GACAGTGATGCCTGTGGGAAAACCTTCAGTCATTCCATAGAAGTTACTCAATTTGGAAGA
ACTCAAACTAGAGAGAAACCCTGTAAATACCCTGAGACTGTTAAGTCTTTCAGTCCTTTT
GCCCCTCTTGGTGAACAAAAAATAATGAAAAGAGGAAAGAGATTGTATGAAGGTAAGGAT
TTTGGGGACATCTTTACCCTGAGTTCATC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTTGCGCCGAACATGGCCGCCGCCGCCGGCGCCGGTGCCGCCCGCCCGGCCGAGCCTGG
AACACAAGATTGAAAATGACAGCTCAAGACCTTACTGAGGAACTGTCCTGTGACATGGAG
TTGGAAGGATTTACGAGACAGGGTCCTCACTTCTCCATTTTAGATGACAGTTGGAATTGT
GAGAGCCAGGAGGGATGTTTGAAGCGATCAGCCTTAACTCATGAGGAACCAGGAGCTCAG
AAAGCAGTTCATGAATATCCTGGATTTGGGGAGCATTTGAGTGTGAGCCCAGACCTTCCA
CGATATCAAAGAGTTCCTACAACAAATGGTTTCTGTGTACATGGCTCATATGTTAAAAGT
CTGGATTGTGACCCAGCTTTACACAGTTGCCACAAAAGTTATGTAGCTAGGAGAACAGGT
GACAGTGATGCCTGTGGGAAAACCTTCAGTCATTCCATAGAAGTTACTCAATTTGGAAGA
ACTCAAACTAGAGAGAAACCCTGTAAATACCCTGAGACTGTTAAGTCTTTCAGTCCTTTT
GCCCCTCTTGGTGAACAAAAAATAATGAAAAGAGGAAAGAGATTGTATGAAGGTAAGGAT
TTTGGGGACATCTTTACCCTGAGTTCATC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               207-326, + strand, RNAz p=0.883648

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               207-326, + strand, RNAz p=0.883648

Homologous human UTR: 1 entry(ies)

More info

Homologous human UTR: 1 entry(ies)

Help | Less info


               
               3' of BC047501, +

Homologous human UTR: 1 entry(ies)

Help | Less info

Human gene identifier and UTR site,
human gene reading direction


               
               3' of BC047501, +

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               54-629, gnl|bosTau2|chr18 (56315442-56316020)
               

               
               54-629, gnl|Hg17|chr19 (63332692-63332137)
               

               
               54-629, gnl|Mm7|chr7 (11398249-11397665)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               54-629, gnl|bosTau2|chr18 (56315442-56316020)
               

               
               54-629, gnl|Hg17|chr19 (63332692-63332137)
               

               
               54-629, gnl|Mm7|chr7 (11398249-11397665)

	54-629, gnl\|bosTau2\|chr18 (56315442-56316020)
	54-629, gnl\|Hg17\|chr19 (63332692-63332137)
	54-629, gnl\|Mm7\|chr7 (11398249-11397665)