Non-Coding RNA Search

Ova1-OVRM10009G07

Sequence:


               
               TTTGTTTGTTTTTAGACAGCTCTTTCTAATCTGGCTACTGCTTGAAGCCTGTTTTCTACA
AGGACTCCAAAGGCTGAAGTGTCCCAGGGCACAGCATGAGGACAAATTTCTCATCAGATA
AACGGCCTTTAGGATCTTTCCTTTGTTAGTGTCTTCCTCAAACCGTGTTTCCCATTACCT
TCCTCTGGTCCCCTTTCGGTCAATAAGTGAAGTTCTTCCAGGCCACAGAGGCAATAACAT
CACCTTCTATGTCTCCTCTCCTCCTCTGGCCATCTTGGGAAACAAAATATTATTTCTTCC
TAGCCCAGGCTTGACAGCCACTCTTCATGGGCAGCTCCCATCTGGACTCCAGACTCTGGC
CACAATGAGGTCAGAGGCTTTAAGAGAGATTTCTGAATGGATATTATAGGGAGTGTGGGT
TTCCCTCACCTGCTATAGAGTATAGCCTGAGAAGACATGTATTTGGAATCTTAATATTTT
GTAGCATGGCTATGTCCATTTTAAGATCTCTGGTGGGTTGGAGATATTTAGGTGTGGATT
AAGAGGACGAGGAGCATTTTTCTTAGTAAAGTGTTCAAATACTGTTTTGAACATTTCCAG
CTATTGCTTATTGCCAGTCCTTCTGAGCGTTCCACTCCCAAACCATCTTCTCTAGTATTA
ACAGGATCTTTAGTCTTAGAAGACTGCTGTCAGTTCTGAGCTTTCCCCAGTGACTGACTG
GCCTTGGTGTTGGCTGCAACCTTCTGATA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTGTTTGTTTTTAGACAGCTCTTTCTAATCTGGCTACTGCTTGAAGCCTGTTTTCTACA
AGGACTCCAAAGGCTGAAGTGTCCCAGGGCACAGCATGAGGACAAATTTCTCATCAGATA
AACGGCCTTTAGGATCTTTCCTTTGTTAGTGTCTTCCTCAAACCGTGTTTCCCATTACCT
TCCTCTGGTCCCCTTTCGGTCAATAAGTGAAGTTCTTCCAGGCCACAGAGGCAATAACAT
CACCTTCTATGTCTCCTCTCCTCCTCTGGCCATCTTGGGAAACAAAATATTATTTCTTCC
TAGCCCAGGCTTGACAGCCACTCTTCATGGGCAGCTCCCATCTGGACTCCAGACTCTGGC
CACAATGAGGTCAGAGGCTTTAAGAGAGATTTCTGAATGGATATTATAGGGAGTGTGGGT
TTCCCTCACCTGCTATAGAGTATAGCCTGAGAAGACATGTATTTGGAATCTTAATATTTT
GTAGCATGGCTATGTCCATTTTAAGATCTCTGGTGGGTTGGAGATATTTAGGTGTGGATT
AAGAGGACGAGGAGCATTTTTCTTAGTAAAGTGTTCAAATACTGTTTTGAACATTTCCAG
CTATTGCTTATTGCCAGTCCTTCTGAGCGTTCCACTCCCAAACCATCTTCTCTAGTATTA
ACAGGATCTTTAGTCTTAGAAGACTGCTGTCAGTTCTGAGCTTTCCCCAGTGACTGACTG
GCCTTGGTGTTGGCTGCAACCTTCTGATA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               348-467, - strand, RNAz p=0.864646

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               348-467, - strand, RNAz p=0.864646

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               36-501, gnl|bosTau2|chr2 (73470448-73470916)
               

               
               36-501, gnl|Hg17|chr1 (32308107-32308505)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               36-501, gnl|bosTau2|chr2 (73470448-73470916)
               

               
               36-501, gnl|Hg17|chr1 (32308107-32308505)

	36-501, gnl\|bosTau2\|chr2 (73470448-73470916)
	36-501, gnl\|Hg17\|chr1 (32308107-32308505)