Non-Coding RNA Search

Ova1-OVRM10015C09

Sequence:


               
               TTTTAAAAAGCAAAAGGAAgagttccctttgtggctcagcaggttaggaacctgactagg
acccatgaggatgtgggttcaatccctggccccactcagtaggttaaggatctggtgttg
ccacaatatagatcacagacttggctttgatcaggcgttgccatggctatggcataagcc
agcagctgcagctccgatttgacccgtagcctgggaactttccacatgctgcaggtgagg
cccAAAAAAGAAAAAGAAAGAAACAAAGAAGGAAAAAAAAAAAAGCAAAAGGAGGCCGTT
GGCTGTGACCATGTCTATCTCTCATAAATGGTGTAGTTATTTCTTTTATCAGGTAGACTG
TCTCCTTTCCATCCCCCACCCCCAACAAAAACTGTAGAGATTAGGGTTTTGTTGTTGACA
TTGAATTTTATTGTGTATCCTTTTTTGTCCTTTGTTGCTTTTTGCCTTTATTTCTGTTTT
GCCTCTAACTAAAAAGAGTTTTGATTTGCAGGTGAACTCTTTAGACAGAGGCTAAATGCT
GCTGATATTGTAGCACCAGAACCTCATGATTTCTGTGCAGAAAGACCAGTTGATAGTAAC
GCAGAATTTTCTTATTCCTTACTGATCACAGAANATGAGTTTTGGCACANAACCTTGAAA
GTCTAACAACAGACCCATGACCTCTAAAAGCAGGCATTTAATAATTTCTGAATATTCACT
ATTCAATAACAGTATAATCACTGGGAAGCATTATTAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTAAAAAGCAAAAGGAAgagttccctttgtggctcagcaggttaggaacctgactagg
acccatgaggatgtgggttcaatccctggccccactcagtaggttaaggatctggtgttg
ccacaatatagatcacagacttggctttgatcaggcgttgccatggctatggcataagcc
agcagctgcagctccgatttgacccgtagcctgggaactttccacatgctgcaggtgagg
cccAAAAAAGAAAAAGAAAGAAACAAAGAAGGAAAAAAAAAAAAGCAAAAGGAGGCCGTT
GGCTGTGACCATGTCTATCTCTCATAAATGGTGTAGTTATTTCTTTTATCAGGTAGACTG
TCTCCTTTCCATCCCCCACCCCCAACAAAAACTGTAGAGATTAGGGTTTTGTTGTTGACA
TTGAATTTTATTGTGTATCCTTTTTTGTCCTTTGTTGCTTTTTGCCTTTATTTCTGTTTT
GCCTCTAACTAAAAAGAGTTTTGATTTGCAGGTGAACTCTTTAGACAGAGGCTAAATGCT
GCTGATATTGTAGCACCAGAACCTCATGATTTCTGTGCAGAAAGACCAGTTGATAGTAAC
GCAGAATTTTCTTATTCCTTACTGATCACAGAANATGAGTTTTGGCACANAACCTTGAAA
GTCTAACAACAGACCCATGACCTCTAAAAGCAGGCATTTAATAATTTCTGAATATTCACT
ATTCAATAACAGTATAATCACTGGGAAGCATTATTAC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               453-563, - strand, RNAz p=0.943255

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               453-563, - strand, RNAz p=0.943255

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               373-743, gnl|bosTau2|chr4 (46610251-46609869)
               

               
               373-743, gnl|Mm7|chr6 (149117237-149116908)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               373-743, gnl|bosTau2|chr4 (46610251-46609869)
               

               
               373-743, gnl|Mm7|chr6 (149117237-149116908)

	373-743, gnl\|bosTau2\|chr4 (46610251-46609869)
	373-743, gnl\|Mm7\|chr6 (149117237-149116908)