Ova1-OVRM10015F11
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGCAGCAGGAGGCGGCGGCGGCGGCTATGGGGGCTCGTCCTCGGGGTACGGGGTGCTGAG CTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAG CCTCAGCAAGGCGGCCGCCGGCGCGGCGGCGGGGGGCTTCCAGCGCTTCGCCGGGCAGAA CCAGCACCCGTCGGGGGCCACCCCGACCCTCAACCAGCTGCTCACCTCGCCCAGCCCCAT GATGAGGAGCTACGGCGGCAGCTACCCCACAGCGGTATCCAATCGGCATTCAAGGTCGGA CCCCAGGGGCCATGGGGGGAATGCAGTATCCACAGCAGCAGATGCCCCCTCAGTATGGAC AGCAAGGTGTGAGTGGTTACTGCCAGCAGGGCCAGCAGCCTTACTACAACCAGCAGCCAC AGCCTCCGCACCTTCCCCCGCAGGCGCAGTATCTGCCATCCCAGTCCCAGCAGAGGTACC AGCCACAGCAGGACATGTCTCAGGAAGGCTATGGAACTAGGTCTCAACCTCCTCTGGCTC CCGGAAAACCTAACCATGAAGACTTGAACTTGATACAGCAAGAAAGACCGTCGAGTTTAC CAGACCTGTCTGGCTCCATCGACGACCTCCCCACGGGAACGGAAGCAGCTCTGAGCTCTG CAGACAGTGCATCCGGGTCCACGAGCAGCCAAGGGGATCAGAGCAACCCAGCTCAGTCGC CTTTCTCTTCACACGCATCTCCCCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGCAGCAGGAGGCGGCGGCGGCGGCTATGGGGGCTCGTCCTCGGGGTACGGGGTGCTGAG CTCCCCCCGGCAGCAGGGCGGCGGCATGATGATGGGCCCCGGGGGCGGCGGGGCCGCGAG CCTCAGCAAGGCGGCCGCCGGCGCGGCGGCGGGGGGCTTCCAGCGCTTCGCCGGGCAGAA CCAGCACCCGTCGGGGGCCACCCCGACCCTCAACCAGCTGCTCACCTCGCCCAGCCCCAT GATGAGGAGCTACGGCGGCAGCTACCCCACAGCGGTATCCAATCGGCATTCAAGGTCGGA CCCCAGGGGCCATGGGGGGAATGCAGTATCCACAGCAGCAGATGCCCCCTCAGTATGGAC AGCAAGGTGTGAGTGGTTACTGCCAGCAGGGCCAGCAGCCTTACTACAACCAGCAGCCAC AGCCTCCGCACCTTCCCCCGCAGGCGCAGTATCTGCCATCCCAGTCCCAGCAGAGGTACC AGCCACAGCAGGACATGTCTCAGGAAGGCTATGGAACTAGGTCTCAACCTCCTCTGGCTC CCGGAAAACCTAACCATGAAGACTTGAACTTGATACAGCAAGAAAGACCGTCGAGTTTAC CAGACCTGTCTGGCTCCATCGACGACCTCCCCACGGGAACGGAAGCAGCTCTGAGCTCTG CAGACAGTGCATCCGGGTCCACGAGCAGCCAAGGGGATCAGAGCAACCCAGCTCAGTCGC CTTTCTCTTCACACGCATCTCCCCAT |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 378-488, - strand, RNAz p=0.599012 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 378-488, - strand, RNAz p=0.599012 |
| Aligned organism(s): 35 entry(ies) | More info |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
| 339-492, gnl|bosTau2|chr9 (57294023-57293870) | |
| 339-492, gnl|canFam2|chr1 (49538516-49538658) | |
| 339-492, gnl|danRer3|chr14 (32370115-32370246) | |
| 339-492, gnl|dasNov1|scaffold_61446 (1473-1358) | |
| 339-492, gnl|echTel1|scaffold_279543 (2744-2602) | |
| 339-492, gnl|galGal2|chr3 (50187112-50187248) | |
| 339-492, gnl|hg17|chr6 (157314593-157314735) | |
| 339-492, gnl|Hg17|chr6 (157314620-157314773) | |
| 339-492, gnl|loxAfr1|scaffold_40510 (8409-8549) | |
| 339-492, gnl|mm7|chr17 (5043483-5043625) | |
| 339-492, gnl|Mm7|chr17 (5043510-5043672) | |
| 339-492, gnl|monDom2|scaffold_0 (47191099-47190962) | |
| 339-492, gnl|panTro1|chr5 (160991517-160991659) | |
| 339-492, gnl|rheMac2|chr4 (106050503-106050361) | |
| 339-492, gnl|rn3|chr1 (40076466-40076608) | |
| 339-492, gnl|xenTro1|scaffold_124 (1867683-1867542) | |
| 603-746, gnl|bosTau2|chr9 (57064940-57064797) | |
| 603-746, gnl|canFam2|chr1 (49718273-49718402) | |
| 603-746, gnl|danRer3|chr14 (32432518-32432649) | |
| 603-746, gnl|dasNov1|scaffold_69926 (117-4) | |
| 603-746, gnl|echTel1|scaffold_278833 (40279-40150) | |
| 603-746, gnl|fr1|chrUn (253935030-253934877) | |
| 603-746, gnl|galGal2|chr3 (50328020-50328149) | |
| 603-746, gnl|hg17|chr6 (157497896-157498025) | |
| 603-746, gnl|Hg17|chr6 (157497909-157498052) | |
| 603-746, gnl|loxAfr1|scaffold_20457 (873-1002) | |
| 603-746, gnl|mm7|chr17 (5187783-5187912) | |
| 603-746, gnl|Mm7|chr17 (5187796-5187939) | |
| 603-746, gnl|monDom2|scaffold_0 (46941159-46941021) | |
| 603-746, gnl|oryCun1|scaffold_203527 (6604-6483) | |
| 603-746, gnl|panTro1|chr5_random (13956937-13956808) | |
| 603-746, gnl|rheMac2|chr4 (105863924-105863795) | |
| 603-746, gnl|rn3|chr1 (40224165-40224294) | |
| 603-746, gnl|tetNig1|chr10 (3579656-3579809) | |
| 603-746, gnl|xenTro1|scaffold_124 (1764956-1764827) |
| Aligned organism(s): 35 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 339-492, gnl|bosTau2|chr9 (57294023-57293870) | |
| 339-492, gnl|canFam2|chr1 (49538516-49538658) | |
| 339-492, gnl|danRer3|chr14 (32370115-32370246) | |
| 339-492, gnl|dasNov1|scaffold_61446 (1473-1358) | |
| 339-492, gnl|echTel1|scaffold_279543 (2744-2602) | |
| 339-492, gnl|galGal2|chr3 (50187112-50187248) | |
| 339-492, gnl|hg17|chr6 (157314593-157314735) | |
| 339-492, gnl|Hg17|chr6 (157314620-157314773) | |
| 339-492, gnl|loxAfr1|scaffold_40510 (8409-8549) | |
| 339-492, gnl|mm7|chr17 (5043483-5043625) | |
| 339-492, gnl|Mm7|chr17 (5043510-5043672) | |
| 339-492, gnl|monDom2|scaffold_0 (47191099-47190962) | |
| 339-492, gnl|panTro1|chr5 (160991517-160991659) | |
| 339-492, gnl|rheMac2|chr4 (106050503-106050361) | |
| 339-492, gnl|rn3|chr1 (40076466-40076608) | |
| 339-492, gnl|xenTro1|scaffold_124 (1867683-1867542) | |
| 603-746, gnl|bosTau2|chr9 (57064940-57064797) | |
| 603-746, gnl|canFam2|chr1 (49718273-49718402) | |
| 603-746, gnl|danRer3|chr14 (32432518-32432649) | |
| 603-746, gnl|dasNov1|scaffold_69926 (117-4) | |
| 603-746, gnl|echTel1|scaffold_278833 (40279-40150) | |
| 603-746, gnl|fr1|chrUn (253935030-253934877) | |
| 603-746, gnl|galGal2|chr3 (50328020-50328149) | |
| 603-746, gnl|hg17|chr6 (157497896-157498025) | |
| 603-746, gnl|Hg17|chr6 (157497909-157498052) | |
| 603-746, gnl|loxAfr1|scaffold_20457 (873-1002) | |
| 603-746, gnl|mm7|chr17 (5187783-5187912) | |
| 603-746, gnl|Mm7|chr17 (5187796-5187939) | |
| 603-746, gnl|monDom2|scaffold_0 (46941159-46941021) | |
| 603-746, gnl|oryCun1|scaffold_203527 (6604-6483) | |
| 603-746, gnl|panTro1|chr5_random (13956937-13956808) | |
| 603-746, gnl|rheMac2|chr4 (105863924-105863795) | |
| 603-746, gnl|rn3|chr1 (40224165-40224294) | |
| 603-746, gnl|tetNig1|chr10 (3579656-3579809) | |
| 603-746, gnl|xenTro1|scaffold_124 (1764956-1764827) |