Non-Coding RNA Search

Ova1-OVRM10018F10

Sequence:


               
               TGGATGTATCGTAAGAACTATTAGATTTGATTCTTATTAATTTTTCTGCCCAGCTTCATT
GTTGGAAAGAAATAAATATTTTTGGTATCTCAGTGTTACTTTTGACCTCATGCTTATATT
GGCTGGAGAGCAAACATTAAGGTGATGGCCACAATTACTCATGCTTAGCTGTGAAAGAGA
GGCATAATAAGAATTATTTAATATTTCACTGACAAATGATCAAGTAGATAACTTTTTTTG
AGCTTTTACATCCATTGGCTAGGATTTTTTAATGGGATAATAATATGAGGTTTCATATTT
TTTTGCTTAGTAGTTATGCCCTCCCATGTCCTGTATGTGTTCCTTCCCCCCCGCCCAAAT
GGTGACATGATACTTGATTCCACACAATCATTATGCTTTCAACTCAGTATTGAGACCAGG
ACTTGAACTTTGTACATCAAATTCTATTCCTAGATTCAGTGCCCAATCTGCCAAGTGAAA
TTGATTTTTGCTTTATCTCTAAAGTATTGTCCCATTTTTAACTCTCTTCCTCGTGATCAT
TCCTCCTGTCTAGGAGAAGCAATAGGTTCCTATTTTGCAGGANACAAAGTAGAAAGGGAA
CAATGATCTGGGATGAAAATCAAAAAGTAAAGGTTTATAGGGGTTTAAAAATTTTAGTCC
AAACATTTGGTCCCCACAGTCTGCAAATATAAATACAAGATTTATATTTGCCTAATGAAG
TGCTCCCCTTCATGTAAATG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGGATGTATCGTAAGAACTATTAGATTTGATTCTTATTAATTTTTCTGCCCAGCTTCATT
GTTGGAAAGAAATAAATATTTTTGGTATCTCAGTGTTACTTTTGACCTCATGCTTATATT
GGCTGGAGAGCAAACATTAAGGTGATGGCCACAATTACTCATGCTTAGCTGTGAAAGAGA
GGCATAATAAGAATTATTTAATATTTCACTGACAAATGATCAAGTAGATAACTTTTTTTG
AGCTTTTACATCCATTGGCTAGGATTTTTTAATGGGATAATAATATGAGGTTTCATATTT
TTTTGCTTAGTAGTTATGCCCTCCCATGTCCTGTATGTGTTCCTTCCCCCCCGCCCAAAT
GGTGACATGATACTTGATTCCACACAATCATTATGCTTTCAACTCAGTATTGAGACCAGG
ACTTGAACTTTGTACATCAAATTCTATTCCTAGATTCAGTGCCCAATCTGCCAAGTGAAA
TTGATTTTTGCTTTATCTCTAAAGTATTGTCCCATTTTTAACTCTCTTCCTCGTGATCAT
TCCTCCTGTCTAGGAGAAGCAATAGGTTCCTATTTTGCAGGANACAAAGTAGAAAGGGAA
CAATGATCTGGGATGAAAATCAAAAAGTAAAGGTTTATAGGGGTTTAAAAATTTTAGTCC
AAACATTTGGTCCCCACAGTCTGCAAATATAAATACAAGATTTATATTTGCCTAATGAAG
TGCTCCCCTTCATGTAAATG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               504-654, - strand, RNAz p=0.976326

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               504-654, - strand, RNAz p=0.976326

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               46-738, gnl|bosTau2|chr28 (23771115-23771833)
               

               
               46-738, gnl|Hg17|chr10 (74250093-74251082)
               

               
               46-738, gnl|Mm7|chr10 (59029190-59028539)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               46-738, gnl|bosTau2|chr28 (23771115-23771833)
               

               
               46-738, gnl|Hg17|chr10 (74250093-74251082)
               

               
               46-738, gnl|Mm7|chr10 (59029190-59028539)

	46-738, gnl\|bosTau2\|chr28 (23771115-23771833)
	46-738, gnl\|Hg17\|chr10 (74250093-74251082)
	46-738, gnl\|Mm7\|chr10 (59029190-59028539)