Non-Coding RNA Search

Ova1-OVRM10019E12

Sequence:


               
               TCTTTCCTAAGTTTTCATTGCCTTTTTTTCCCATGAACTTTTTCTTCTCCTTGTCTCCTC
CCTTCCTCCCTCACCCCTCCCACAGGAGTGGAAGCTAAAATGAAAGTCCCCTGAGAATGG
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATTTTTTTTTTTG
GCTCCCCTTTTCCCAGGAAAACCCAGACTTTCATTTCCAGCCTTGCCAGTACATACCTGG
CCAAAAACAGGTATCCACTGTTACCTATTTATCCCCAGTCAAAGCTCAGATTCCTTTGAA
AACTAAAGATTTTTTTCCAAAAATGATAGTTTGTTTTCCTTGGGCTTAACAAAAAGCCCT
CCCCCAACCAACTCCCCTCTTCCTGCATTGCAGTTTTCCCTTTCTTAGTGAAATCATGAT
TTCTTTCTCCTTGGTTGTCTCTTAGTCAGATATGGAATATCTGGGAACCTCTTAGCAGTG
GCGGGTCATGGCTATGATGTCATTGAGGAAGGGCTGTCCAGAAGAGCCTGTTTGTTTCGT
TGTAGTTGTGATCTCCATTGCTGTGCATGGGAATTGATTTTACACTGTGTGTGTCATGTT
CTCTAAGACCAGGGCCTCCCAACCCTTTTAGCCTAGGATCTTGACCTTGTTNAATTAATG
TTCAGTGGGCCCTTTACCGCCCCCATCCAGAAAAATCTCTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCTTTCCTAAGTTTTCATTGCCTTTTTTTCCCATGAACTTTTTCTTCTCCTTGTCTCCTC
CCTTCCTCCCTCACCCCTCCCACAGGAGTGGAAGCTAAAATGAAAGTCCCCTGAGAATGG
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAATTTTTTTTTTTG
GCTCCCCTTTTCCCAGGAAAACCCAGACTTTCATTTCCAGCCTTGCCAGTACATACCTGG
CCAAAAACAGGTATCCACTGTTACCTATTTATCCCCAGTCAAAGCTCAGATTCCTTTGAA
AACTAAAGATTTTTTTCCAAAAATGATAGTTTGTTTTCCTTGGGCTTAACAAAAAGCCCT
CCCCCAACCAACTCCCCTCTTCCTGCATTGCAGTTTTCCCTTTCTTAGTGAAATCATGAT
TTCTTTCTCCTTGGTTGTCTCTTAGTCAGATATGGAATATCTGGGAACCTCTTAGCAGTG
GCGGGTCATGGCTATGATGTCATTGAGGAAGGGCTGTCCAGAAGAGCCTGTTTGTTTCGT
TGTAGTTGTGATCTCCATTGCTGTGCATGGGAATTGATTTTACACTGTGTGTGTCATGTT
CTCTAAGACCAGGGCCTCCCAACCCTTTTAGCCTAGGATCTTGACCTTGTTNAATTAATG
TTCAGTGGGCCCTTTACCGCCCCCATCCAGAAAAATCTCTGTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               175-280, - strand, RNAz p=0.780239

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               175-280, - strand, RNAz p=0.780239

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               175-695, gnl|bosTau2|chr22 (27896280-27895753)
               

               
               175-695, gnl|Hg17|chr3 (64545034-64544500)
               

               
               175-695, gnl|Mm7|chr6 (92929046-92928546)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               175-695, gnl|bosTau2|chr22 (27896280-27895753)
               

               
               175-695, gnl|Hg17|chr3 (64545034-64544500)
               

               
               175-695, gnl|Mm7|chr6 (92929046-92928546)

	175-695, gnl\|bosTau2\|chr22 (27896280-27895753)
	175-695, gnl\|Hg17\|chr3 (64545034-64544500)
	175-695, gnl\|Mm7\|chr6 (92929046-92928546)