Non-Coding RNA Search

Ova1-OVRM10021G06

Sequence:


               
               ACCACGGCGTCAGCCAGACCTCTGGGTCTCAGCTTCGTCAGAGGTAAGCGGATCATAAAA
TTATTTACCTCTTTTGGCTGTTGTGAAGATGAAATGCATGTTCCATTCTCAGCTGTCTCT
AACTAACCAACATGCCGTTGCTATTAACGTCATCCTGCAGCTGCAGGACTATCTTTAAAT
CTAGTTTGTTTAGAGGCGTCCGTAGCCACCAAAACCATTATTCTCTTTCTGTGACCACCT
CTCCCCCTGCAGCCTCCTTCCCCAGCCCAGCCTGGACGCCTGGCCACAGCCGTTGTCATG
GCAGCCGTTGGCTACAGGTCCTGCTGGGGTCAGACAGTTTTGCTGCGACATTCCGAGTAA
ACTCCTTTTTGGCCAGGGTGGCTGGAGTCCCTAGGCCTGAAGTCAGGACACATAAAACCC
CTCTTTCCTTGTGATCTCGAAGGTCCTCTAAGCCTGGCTTCAGCGAAGCCCTGGAGGGGA
GTCAGTAGGAAGTGTTAGCTAACTTGAAGGCGATTACTAAAGCCCAAAGACCTTAAAAGT
TAGAAAAAGGCAAAGGACGCAAACGCCATGTCTTTAAATAGCTTTTTTGTTTTGTCGGAA
CAGCTACAGAATTGTTAAGCCAACCACTTCTTGGAGGGGAAGGAGGTTTGGGGCCAAACA
CACATTTCAGGGAAAATAGCGGAAAAACAATGGTTGAAAACGCTTTATATTTTTAAACAA
GTGGTTNTACATCTTTCGTGCTAATTTCATAACCACAGATGGGAGGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACCACGGCGTCAGCCAGACCTCTGGGTCTCAGCTTCGTCAGAGGTAAGCGGATCATAAAA
TTATTTACCTCTTTTGGCTGTTGTGAAGATGAAATGCATGTTCCATTCTCAGCTGTCTCT
AACTAACCAACATGCCGTTGCTATTAACGTCATCCTGCAGCTGCAGGACTATCTTTAAAT
CTAGTTTGTTTAGAGGCGTCCGTAGCCACCAAAACCATTATTCTCTTTCTGTGACCACCT
CTCCCCCTGCAGCCTCCTTCCCCAGCCCAGCCTGGACGCCTGGCCACAGCCGTTGTCATG
GCAGCCGTTGGCTACAGGTCCTGCTGGGGTCAGACAGTTTTGCTGCGACATTCCGAGTAA
ACTCCTTTTTGGCCAGGGTGGCTGGAGTCCCTAGGCCTGAAGTCAGGACACATAAAACCC
CTCTTTCCTTGTGATCTCGAAGGTCCTCTAAGCCTGGCTTCAGCGAAGCCCTGGAGGGGA
GTCAGTAGGAAGTGTTAGCTAACTTGAAGGCGATTACTAAAGCCCAAAGACCTTAAAAGT
TAGAAAAAGGCAAAGGACGCAAACGCCATGTCTTTAAATAGCTTTTTTGTTTTGTCGGAA
CAGCTACAGAATTGTTAAGCCAACCACTTCTTGGAGGGGAAGGAGGTTTGGGGCCAAACA
CACATTTCAGGGAAAATAGCGGAAAAACAATGGTTGAAAACGCTTTATATTTTTAAACAA
GTGGTTNTACATCTTTCGTGCTAATTTCATAACCACAGATGGGAGGT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               577-677, - strand, RNAz p=0.748089

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               577-677, - strand, RNAz p=0.748089

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               11-760, gnl|bosTau2|chr17 (6334127-6334874)
               

               
               11-760, gnl|Hg17|chr4 (147511605-147512991)
               

               
               11-760, gnl|Mm7|chr8 (77292157-77291246)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               11-760, gnl|bosTau2|chr17 (6334127-6334874)
               

               
               11-760, gnl|Hg17|chr4 (147511605-147512991)
               

               
               11-760, gnl|Mm7|chr8 (77292157-77291246)

	11-760, gnl\|bosTau2\|chr17 (6334127-6334874)
	11-760, gnl\|Hg17\|chr4 (147511605-147512991)
	11-760, gnl\|Mm7\|chr8 (77292157-77291246)