Non-Coding RNA Search

Ova1-OVRM10021H06

Sequence:


               
               TATAATGGAAAAAATAAAAATCATAAAATAAAGTAAAGGCAGAAATCATGAATAATCTAG
AAGAGTTATGAAATATAATTGATATAAAAGTGATTACAATGTGAATTTATCCAGCATCAT
GGTAACCAAAGCAGACCTCTCTGCCTTTTATCCCTCAGTGTTAGAAAGTATCTTTTCTAC
TCTTTTGCCTACTAGGGTAAACCCTCCCCTACCCGCTAGGACCTTTATCATCCTTGCTTA
TCCTACCACAGCTGGAAGTTGGCTAGCTTTTGGAATAGATACTAGAGAGACTGTGTTTGC
ATTTTTTCCTCTATACCATCTGTTCACTGAATGGATTACAGTTGCCTCCAGTTAAAAAGC
AGATTGTCTTGGCCCAAGGTCAGGAGAGAAGTCTCAGCATCCTGTTTGTTGAAAACCTCT
TACCATCTCTGCAAGACTGGAATGTAACATCTGCAATTAGAACTTGGGTCCCTTGACTGG
TTCCTCTGGCTATTGCCTAGCAACCCTATCCTGGAAATTCACAAGAGCAGCTCTTATCTG
GCCTGGCCTCCTATTTCTTCATCTCAATGTGTTTTCTATTGGTCTTACCTTTTTTTGTTT
TGTTTTGTTTTTTGTTTTTTTTTTTAAAGATGACTGCTGTCAGTCTTGATTTACTTGCAT
TATGTGCTCGTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TATAATGGAAAAAATAAAAATCATAAAATAAAGTAAAGGCAGAAATCATGAATAATCTAG
AAGAGTTATGAAATATAATTGATATAAAAGTGATTACAATGTGAATTTATCCAGCATCAT
GGTAACCAAAGCAGACCTCTCTGCCTTTTATCCCTCAGTGTTAGAAAGTATCTTTTCTAC
TCTTTTGCCTACTAGGGTAAACCCTCCCCTACCCGCTAGGACCTTTATCATCCTTGCTTA
TCCTACCACAGCTGGAAGTTGGCTAGCTTTTGGAATAGATACTAGAGAGACTGTGTTTGC
ATTTTTTCCTCTATACCATCTGTTCACTGAATGGATTACAGTTGCCTCCAGTTAAAAAGC
AGATTGTCTTGGCCCAAGGTCAGGAGAGAAGTCTCAGCATCCTGTTTGTTGAAAACCTCT
TACCATCTCTGCAAGACTGGAATGTAACATCTGCAATTAGAACTTGGGTCCCTTGACTGG
TTCCTCTGGCTATTGCCTAGCAACCCTATCCTGGAAATTCACAAGAGCAGCTCTTATCTG
GCCTGGCCTCCTATTTCTTCATCTCAATGTGTTTTCTATTGGTCTTACCTTTTTTTGTTT
TGTTTTGTTTTTTGTTTTTTTTTTTAAAGATGACTGCTGTCAGTCTTGATTTACTTGCAT
TATGTGCTCGTGCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               335-449, - strand, RNAz p=0.842284

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               335-449, - strand, RNAz p=0.842284

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               34-594, gnl|bosTau2|chr1 (36318221-36318777)
               

               
               34-594, gnl|Hg17|chr3 (117591020-117590455)
               

               
               34-594, gnl|Mm7|chr16 (41309329-41309880)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               34-594, gnl|bosTau2|chr1 (36318221-36318777)
               

               
               34-594, gnl|Hg17|chr3 (117591020-117590455)
               

               
               34-594, gnl|Mm7|chr16 (41309329-41309880)

	34-594, gnl\|bosTau2\|chr1 (36318221-36318777)
	34-594, gnl\|Hg17\|chr3 (117591020-117590455)
	34-594, gnl\|Mm7\|chr16 (41309329-41309880)