Non-Coding RNA Search

Ova1-OVRM10032D01

Sequence:


               
               TTCATCTTTACATTTCCGTGCATGTAATCTTCCTCTGGAATGTATCTCCCAGCTTATTTA
TATTAAGGCACTGACTGGAAGCGCAACGTGTGTATTTGCTTGACCACTGGGCACACAGTG
ATTCTTTCCCTTTTTAAACCCTAAATTTGGCACTTACACACTCCCTGCCGTTGTGAGTGT
ATCTTATCTCCAGACGAAGCAGTGAATTCCTTCAGGTGGGGACTTTGCTTCATTTCTCTT
TAAATCCCTTTTGGTATCTGCATTTTGGTTTAGCAGGTGCATAGTAAATGTTTGTTGATT
TAAAAAAATGAACACAAAGTAGACTAATCTTGTGAAGAGCAGAGTTCATAGAGAGCAAAA
TGGTGACAGTGTGGAAAATGGAACGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTCATCTTTACATTTCCGTGCATGTAATCTTCCTCTGGAATGTATCTCCCAGCTTATTTA
TATTAAGGCACTGACTGGAAGCGCAACGTGTGTATTTGCTTGACCACTGGGCACACAGTG
ATTCTTTCCCTTTTTAAACCCTAAATTTGGCACTTACACACTCCCTGCCGTTGTGAGTGT
ATCTTATCTCCAGACGAAGCAGTGAATTCCTTCAGGTGGGGACTTTGCTTCATTTCTCTT
TAAATCCCTTTTGGTATCTGCATTTTGGTTTAGCAGGTGCATAGTAAATGTTTGTTGATT
TAAAAAAATGAACACAAAGTAGACTAATCTTGTGAAGAGCAGAGTTCATAGAGAGCAAAA
TGGTGACAGTGTGGAAAATGGAACGGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               216-334, + strand, RNAz p=0.866969

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               216-334, + strand, RNAz p=0.866969

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               23-373, gnl|bosTau2|chr5 (5773677-5773342)
               

               
               23-373, gnl|Mm7|chr10 (107632505-107632828)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               23-373, gnl|bosTau2|chr5 (5773677-5773342)
               

               
               23-373, gnl|Mm7|chr10 (107632505-107632828)

	23-373, gnl\|bosTau2\|chr5 (5773677-5773342)
	23-373, gnl\|Mm7\|chr10 (107632505-107632828)