Non-Coding RNA Search

Ova1-OVRM10037H02

Sequence:


               
               tttttatggctgaataatattccattgtatgtacacaccacatcttctttatccattcgt
ctgttgatggacatttaggatgtttccatggcttggctattgtgaatcgtgcttctctga
acataggggtacatgtatctttttaaataatagttttgtctggatatagtcccaggagtg
ggattgctggatcacatggttattctaCAAAATAATTAATTTTGAAGGGCTTTTGTGTGG
TGTGCAGAATGTACAGCTCCCCATGGCAGCCTGATCCCTGTTCCGTCCACTCCCTGTCAT
TGCTCTTTGCCTTACACTTGATTTCATCAAAGGCTCACAATACTCTGTGGGGTAAGTGTT
TCTCGAGTCTCTATGTGGATCAGGACACAGGTCCATTAAAATGAATTACCTTGCCCCACT
TTCCATATTTTGTAAATGGAGGAGTCAGAATTCAACCCTGGTGTGACTGACTCCAAATCT
ATGCTCTTTCCACCATGCTTATTTCTTCCTTGTTGCGTATATCTGGTTGTTAAGTAGAGA
CACGACCTTCTGAAATTGCACTCAGTAGTGTTGTAGCACTCAGTAGTGTTGGGTAGTTGG
AGTTTTAAAAAAGAACTGCTTAGAGAAAACTGCCTATGGAAGATATGCCAGGCAAGATGC
TGCTTGCATTTTTTTTCCTTTTTTAAGTCACCCCACAC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               tttttatggctgaataatattccattgtatgtacacaccacatcttctttatccattcgt
ctgttgatggacatttaggatgtttccatggcttggctattgtgaatcgtgcttctctga
acataggggtacatgtatctttttaaataatagttttgtctggatatagtcccaggagtg
ggattgctggatcacatggttattctaCAAAATAATTAATTTTGAAGGGCTTTTGTGTGG
TGTGCAGAATGTACAGCTCCCCATGGCAGCCTGATCCCTGTTCCGTCCACTCCCTGTCAT
TGCTCTTTGCCTTACACTTGATTTCATCAAAGGCTCACAATACTCTGTGGGGTAAGTGTT
TCTCGAGTCTCTATGTGGATCAGGACACAGGTCCATTAAAATGAATTACCTTGCCCCACT
TTCCATATTTTGTAAATGGAGGAGTCAGAATTCAACCCTGGTGTGACTGACTCCAAATCT
ATGCTCTTTCCACCATGCTTATTTCTTCCTTGTTGCGTATATCTGGTTGTTAAGTAGAGA
CACGACCTTCTGAAATTGCACTCAGTAGTGTTGTAGCACTCAGTAGTGTTGGGTAGTTGG
AGTTTTAAAAAAGAACTGCTTAGAGAAAACTGCCTATGGAAGATATGCCAGGCAAGATGC
TGCTTGCATTTTTTTTCCTTTTTTAAGTCACCCCACAC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|62644226|ref|XP_342328.2|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|62644226|ref|XP_342328.2|

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               1-258, gnl|bosTau2|chr4 (2562967-2562712)
               


               
               308-500, gnl|bosTau2|chr13 (20884233-20884046)
               

               
               308-500, gnl|canFam2|chr2 (21599355-21598969)
               

               
               308-500, gnl|hg17|chr10 (18609742-18610105)
               

               
               308-500, gnl|Hg17|chr10 (18609844-18610038)
               

               
               308-500, gnl|mm7|chr2 (14705135-14705403)
               

               
               308-500, gnl|panTro1|chr8 (18908522-18908885)
               

               
               308-500, gnl|rheMac2|chr9 (18573663-18574030)
               

               
               308-500, gnl|rn3|chr17 (88884371-88884627)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-258, gnl|bosTau2|chr4 (2562967-2562712)
               


               
               308-500, gnl|bosTau2|chr13 (20884233-20884046)
               

               
               308-500, gnl|canFam2|chr2 (21599355-21598969)
               

               
               308-500, gnl|hg17|chr10 (18609742-18610105)
               

               
               308-500, gnl|Hg17|chr10 (18609844-18610038)
               

               
               308-500, gnl|mm7|chr2 (14705135-14705403)
               

               
               308-500, gnl|panTro1|chr8 (18908522-18908885)
               

               
               308-500, gnl|rheMac2|chr9 (18573663-18574030)
               

               
               308-500, gnl|rn3|chr17 (88884371-88884627)

	1-258, gnl\|bosTau2\|chr4 (2562967-2562712)

	308-500, gnl\|bosTau2\|chr13 (20884233-20884046)
	308-500, gnl\|canFam2\|chr2 (21599355-21598969)
	308-500, gnl\|hg17\|chr10 (18609742-18610105)
	308-500, gnl\|Hg17\|chr10 (18609844-18610038)
	308-500, gnl\|mm7\|chr2 (14705135-14705403)
	308-500, gnl\|panTro1\|chr8 (18908522-18908885)
	308-500, gnl\|rheMac2\|chr9 (18573663-18574030)
	308-500, gnl\|rn3\|chr17 (88884371-88884627)