Ova1-OVRM10041H05
|
ATTTCTTAGACCTCCAAGAGCAGGTAGGTTCATGCTGCCCACTTGCGCTCCCGACTCCAG
CAAGCTCCCTACGCAGTTTCTGTAAAACCGGGCAGACGCTTCCTGGGCACCTTCTGTTTA
TCTCGTTAACCCTGGTGGTACCAAGAGGCACCTGACATTCTGAGTATGCTAATAATTCGG
TGCCAGCAAGTTTCTGTTATCCTCCAGTTGTAATTGTTAACTTGAATGGAATGCAAAACT
TCTGGTTTGAAACAGAGTTGGTTTTTAACTGTGAATTACTTGACCGGTATGGAAAATGGG
GAGTACATTTTGTCAATTGTGGAAGATGGTTTATGAAAAGCTGTTTTGGAGCTGCTCTGG
CAAATAGAAACATTTGGTACATGGAGCGTCGCTCCTGTGTCTGCAGACTCACTGGTGAAC
TCTACCCCTTAGTAACTCTTGCCTTTGACACTTTTTCATGTTCACAAGCCAAGACTTGCT
TGGGGCTTAGAACAATGAGCTTGTCCTAATGCTGCTTAAAACAAAAGCCACACAAAACTC
TAATGCTTCCAGTGTTCAGGTTTGTTTCTGTGAGTCCTTCCTGCTAGCCCACCCCCACCT
CTGGCAAGTTTGGGATTTTTTTTTTTTTTTTTTGCCCC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATTTCTTAGACCTCCAAGAGCAGGTAGGTTCATGCTGCCCACTTGCGCTCCCGACTCCAG
CAAGCTCCCTACGCAGTTTCTGTAAAACCGGGCAGACGCTTCCTGGGCACCTTCTGTTTA
TCTCGTTAACCCTGGTGGTACCAAGAGGCACCTGACATTCTGAGTATGCTAATAATTCGG
TGCCAGCAAGTTTCTGTTATCCTCCAGTTGTAATTGTTAACTTGAATGGAATGCAAAACT
TCTGGTTTGAAACAGAGTTGGTTTTTAACTGTGAATTACTTGACCGGTATGGAAAATGGG
GAGTACATTTTGTCAATTGTGGAAGATGGTTTATGAAAAGCTGTTTTGGAGCTGCTCTGG
CAAATAGAAACATTTGGTACATGGAGCGTCGCTCCTGTGTCTGCAGACTCACTGGTGAAC
TCTACCCCTTAGTAACTCTTGCCTTTGACACTTTTTCATGTTCACAAGCCAAGACTTGCT
TGGGGCTTAGAACAATGAGCTTGTCCTAATGCTGCTTAAAACAAAAGCCACACAAAACTC
TAATGCTTCCAGTGTTCAGGTTTGTTTCTGTGAGTCCTTCCTGCTAGCCCACCCCCACCT
CTGGCAAGTTTGGGATTTTTTTTTTTTTTTTTTGCCCC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
182-246, + strand, RNAmicro p=0.945089 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
182-246, + strand, RNAmicro p=0.945089 |
|
94-526, gnl|bosTau2|chr6 (31326619-31326182) |
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94-526, gnl|canFam2|chr3 (74892345-74891924) |
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94-526, gnl|dasNov1|scaffold_1962 (81320-81741) |
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94-526, gnl|echTel1|scaffold_288387 (86655-87069) |
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94-526, gnl|hg17|chr4 (40357800-40358208) |
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94-526, gnl|Hg17|chr4 (40358224-40357799) |
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94-526, gnl|loxAfr1|scaffold_6489 (58270-58689) |
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94-526, gnl|mm7|chr5 (65436039-65436470) |
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94-526, gnl|Mm7|chr5 (65436484-65436043) |
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94-526, gnl|monDom2|scaffold_26 (5752694-5753184) |
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94-526, gnl|oryCun1|scaffold_190032 (37535-37124) |
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94-526, gnl|panTro1|chr3 (43033869-43034277) |
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94-526, gnl|rheMac2|chr5 (35546302-35546710) |
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94-526, gnl|rn3|chr14 (44784022-44783604) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
94-526, gnl|bosTau2|chr6 (31326619-31326182) |
|
94-526, gnl|canFam2|chr3 (74892345-74891924) |
|
94-526, gnl|dasNov1|scaffold_1962 (81320-81741) |
|
94-526, gnl|echTel1|scaffold_288387 (86655-87069) |
|
94-526, gnl|hg17|chr4 (40357800-40358208) |
|
94-526, gnl|Hg17|chr4 (40358224-40357799) |
|
94-526, gnl|loxAfr1|scaffold_6489 (58270-58689) |
|
94-526, gnl|mm7|chr5 (65436039-65436470) |
|
94-526, gnl|Mm7|chr5 (65436484-65436043) |
|
94-526, gnl|monDom2|scaffold_26 (5752694-5753184) |
|
94-526, gnl|oryCun1|scaffold_190032 (37535-37124) |
|
94-526, gnl|panTro1|chr3 (43033869-43034277) |
|
94-526, gnl|rheMac2|chr5 (35546302-35546710) |
|
94-526, gnl|rn3|chr14 (44784022-44783604) |
