Non-Coding RNA Search

Ova1-OVRM10046C12

Sequence:


               
               ATTTTAGAAGACTATGCTGACCCTTATGATGCTAAACGGACAAAAGGTCAAAGGGATGCA
GAGAGAGTAGGAGAGAATGACGGTTACATGGAACCCTATGATGCACAACAAATGATAACA
GAAATCAGACGACGAGGTTCCAAAGACCCGCTGGTGAAGGCTCTTCAGCTGCTCGACAGC
CCCTGCGAGCCCGGGGAGAACGGCCTGAAGCCCGAGGCTCTGGCCAAGAGACGGGGCTCC
AAGGAGCTCGCCGGGAAGCCGCCGCAGCTGTACGACACGCCCTACGAGCCAGCGGCCGAG
GGCGTCCCGCGCGCGGAGGCCCCCGAGCGGAAGGCGCGGCCCCCCGACGGCCACAGCCGG
CTGCCCCAGGACGACGAGAGGCCCGCGGCTGAGTACGAGCAGCCCTGGGAGTGGAAGAAG
GAGCAGATCGTGCGGGCGCTGTCAGTTTGAAGGCTCTGAGCGACCTTCCATCAAGGAGGA
GTCTGTGAGGCAGCACCACCGACAGAAGAGCTGGACCCAGAAGATCTTGAAGCCAAGCCT
CTCTGACCACAGTGAGGGGGAAAGAGTGGACCCAGCCCTGCCACTGGAGAAGCAGCCTTG
GTATCATGGTGCCATCACCCGTGCTGAGGCTGAGAGTCGACTTACACCCTGCAAAGAAGC
TGGGTACTTGGTTCGGTACAGCGAGTCATGGACCAGTAGGTACTCCATTGCACTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ATTTTAGAAGACTATGCTGACCCTTATGATGCTAAACGGACAAAAGGTCAAAGGGATGCA
GAGAGAGTAGGAGAGAATGACGGTTACATGGAACCCTATGATGCACAACAAATGATAACA
GAAATCAGACGACGAGGTTCCAAAGACCCGCTGGTGAAGGCTCTTCAGCTGCTCGACAGC
CCCTGCGAGCCCGGGGAGAACGGCCTGAAGCCCGAGGCTCTGGCCAAGAGACGGGGCTCC
AAGGAGCTCGCCGGGAAGCCGCCGCAGCTGTACGACACGCCCTACGAGCCAGCGGCCGAG
GGCGTCCCGCGCGCGGAGGCCCCCGAGCGGAAGGCGCGGCCCCCCGACGGCCACAGCCGG
CTGCCCCAGGACGACGAGAGGCCCGCGGCTGAGTACGAGCAGCCCTGGGAGTGGAAGAAG
GAGCAGATCGTGCGGGCGCTGTCAGTTTGAAGGCTCTGAGCGACCTTCCATCAAGGAGGA
GTCTGTGAGGCAGCACCACCGACAGAAGAGCTGGACCCAGAAGATCTTGAAGCCAAGCCT
CTCTGACCACAGTGAGGGGGAAAGAGTGGACCCAGCCCTGCCACTGGAGAAGCAGCCTTG
GTATCATGGTGCCATCACCCGTGCTGAGGCTGAGAGTCGACTTACACCCTGCAAAGAAGC
TGGGTACTTGGTTCGGTACAGCGAGTCATGGACCAGTAGGTACTCCATTGCACTA

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|18676482|dbj|BAB84893.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|18676482|dbj|BAB84893.1|

Aligned organism(s): 9 entry(ies)

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Aligned organism(s): 9 entry(ies)

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               119-455, gnl|bosTau2|chr3 (8541959-8541618)
               

               
               119-455, gnl|Hg17|chr1 (151274908-151274590)
               

               
               119-455, gnl|Mm7|chr3 (89975865-89976180)
               


               
               217-428, gnl|bosTau2|chr10 (45005831-45006030)
               

               
               217-428, gnl|Hg17|chr15 (43254925-43254726)
               

               
               217-428, gnl|Mm7|chr2 (122098152-122097953)
               


               
               598-715, gnl|bosTau2|chr3 (8539278-8539161)
               

               
               598-715, gnl|Hg17|chr1 (151271611-151271494)
               

               
               598-715, gnl|Mm7|chr3 (89978867-89978984)

Aligned organism(s): 9 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               119-455, gnl|bosTau2|chr3 (8541959-8541618)
               

               
               119-455, gnl|Hg17|chr1 (151274908-151274590)
               

               
               119-455, gnl|Mm7|chr3 (89975865-89976180)
               


               
               217-428, gnl|bosTau2|chr10 (45005831-45006030)
               

               
               217-428, gnl|Hg17|chr15 (43254925-43254726)
               

               
               217-428, gnl|Mm7|chr2 (122098152-122097953)
               


               
               598-715, gnl|bosTau2|chr3 (8539278-8539161)
               

               
               598-715, gnl|Hg17|chr1 (151271611-151271494)
               

               
               598-715, gnl|Mm7|chr3 (89978867-89978984)

	119-455, gnl\|bosTau2\|chr3 (8541959-8541618)
	119-455, gnl\|Hg17\|chr1 (151274908-151274590)
	119-455, gnl\|Mm7\|chr3 (89975865-89976180)

	217-428, gnl\|bosTau2\|chr10 (45005831-45006030)
	217-428, gnl\|Hg17\|chr15 (43254925-43254726)
	217-428, gnl\|Mm7\|chr2 (122098152-122097953)

	598-715, gnl\|bosTau2\|chr3 (8539278-8539161)
	598-715, gnl\|Hg17\|chr1 (151271611-151271494)
	598-715, gnl\|Mm7\|chr3 (89978867-89978984)