Non-Coding RNA Search

Ova1-OVRM10047D05

Sequence:


               
               TTAAGCTAACACTCCCTGTGTTCCCAGAGGTGGGTTTCTGTTGTGGCAATGGCATCCAAA
TAAATATTTAGTTGCAGAGATATGGTGTTGGAGTGGCTTAAAGCCAGCATACCTAGAGTT
CTGGAAAAAACTAAAGTGCTCTTTCCTAAAATAGCCATAGGAACATGGGAAAACCACTTA
ATATGGTTTTTGGTTTTTTTTTCCAGTTGTCAACAGTATTGCACTCATATAATCAACACA
GTTAAATGAATTGTTTTAGGTGTATTTCATCACCACTTATTCACTTTTTGTCTCTTTTGT
TAAAATTATCAAGCTATAGAGGGGAGAggagttcctgttgtgtctcagcaggttaagaat
ccagctagtatctgtgaggatgtgggttccagcccagatgtcattcattgggttaaggat
ctggtgatgctgcaagctgtggtgtaggtcacagatgtggcttggatcccatgttgccct
gggtgtggtgtaggctggcagctgcagctccagttccatccctatcctggaaacttccga
atgccacaggtgtggccctTAAAAAAAAAAAAAAAAGATATAGATGGGAGAGTGTGAATG
TTGGAATCAAAAAGATATAGCTCTCCTGAGTTTTGAACTTAATATATGACTGAAGGCACG
ATGCTTAATGATTCTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTAAGCTAACACTCCCTGTGTTCCCAGAGGTGGGTTTCTGTTGTGGCAATGGCATCCAAA
TAAATATTTAGTTGCAGAGATATGGTGTTGGAGTGGCTTAAAGCCAGCATACCTAGAGTT
CTGGAAAAAACTAAAGTGCTCTTTCCTAAAATAGCCATAGGAACATGGGAAAACCACTTA
ATATGGTTTTTGGTTTTTTTTTCCAGTTGTCAACAGTATTGCACTCATATAATCAACACA
GTTAAATGAATTGTTTTAGGTGTATTTCATCACCACTTATTCACTTTTTGTCTCTTTTGT
TAAAATTATCAAGCTATAGAGGGGAGAggagttcctgttgtgtctcagcaggttaagaat
ccagctagtatctgtgaggatgtgggttccagcccagatgtcattcattgggttaaggat
ctggtgatgctgcaagctgtggtgtaggtcacagatgtggcttggatcccatgttgccct
gggtgtggtgtaggctggcagctgcagctccagttccatccctatcctggaaacttccga
atgccacaggtgtggccctTAAAAAAAAAAAAAAAAGATATAGATGGGAGAGTGTGAATG
TTGGAATCAAAAAGATATAGCTCTCCTGAGTTTTGAACTTAATATATGACTGAAGGCACG
ATGCTTAATGATTCTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               1-111, - strand, RNAz p=0.713226

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-111, - strand, RNAz p=0.713226

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-327, gnl|bosTau2|chr11 (75884486-75884799)
               

               
               1-327, gnl|Hg17|chr9 (122788430-122788757)
               

               
               1-327, gnl|Mm7|chr2 (37464522-37464785)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-327, gnl|bosTau2|chr11 (75884486-75884799)
               

               
               1-327, gnl|Hg17|chr9 (122788430-122788757)
               

               
               1-327, gnl|Mm7|chr2 (37464522-37464785)

	1-327, gnl\|bosTau2\|chr11 (75884486-75884799)
	1-327, gnl\|Hg17\|chr9 (122788430-122788757)
	1-327, gnl\|Mm7\|chr2 (37464522-37464785)