Non-Coding RNA Search

Ova1-OVRM10050D01

Sequence:


               
               CTTAATCATTCAGAAAATTTAGATCAATTACTTTAGACTGCTAGCATATGAAGTTATCTT
TATCTTTAAAAACTTTAATGTTGCAAATGAGATTTGAACTTCAAGTGGTATCTGCAACAT
TTGCTGGTCAATTAATTTTGACAAGTCATATATTTTGGAGCCTCATTTTTCCATCTGAGA
ATAATACAGTATTTGCTCACCTACCTCAGAACATTTTCACAAGAATCTAGTACTATNATG
TACTTTAAAACATTTGGTAGATATAAAACACTTTCTTAATATGTGGAGTTATTTTTGTCA
TTATTACTATCAGTGTTATTGGGAACACTACTTTGGCAGAATTATCCTTTCTCAACCACA
GACAGAGCTTTATCTCCCTGCTTCCATATGTGACACATTAGAAGTTACTTGAGCTCAGGG
TCAGTTTTTAACTTTGGCTTCTTAGAGAAGCAATGGAATAAACCAAAGATCAATGTGAAT
ATTTTCCAAGAAAATCATCCNAGAGGAATACCCAGGGAATGATGGAAAGCATTCCAAGGA
CCCCACAGGAAGAACAAGTCTTTGTCTGAGAGCGCTGGGCTGCTCTAAGACCTCATCTTA
GCCATTGTTCAACTCCTTGTTGGAAAAGAATGGTTCCCTGGTCAACTCCTCTTACATTTC
AGTGGCTATGACAGGCTTAATGTCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CTTAATCATTCAGAAAATTTAGATCAATTACTTTAGACTGCTAGCATATGAAGTTATCTT
TATCTTTAAAAACTTTAATGTTGCAAATGAGATTTGAACTTCAAGTGGTATCTGCAACAT
TTGCTGGTCAATTAATTTTGACAAGTCATATATTTTGGAGCCTCATTTTTCCATCTGAGA
ATAATACAGTATTTGCTCACCTACCTCAGAACATTTTCACAAGAATCTAGTACTATNATG
TACTTTAAAACATTTGGTAGATATAAAACACTTTCTTAATATGTGGAGTTATTTTTGTCA
TTATTACTATCAGTGTTATTGGGAACACTACTTTGGCAGAATTATCCTTTCTCAACCACA
GACAGAGCTTTATCTCCCTGCTTCCATATGTGACACATTAGAAGTTACTTGAGCTCAGGG
TCAGTTTTTAACTTTGGCTTCTTAGAGAAGCAATGGAATAAACCAAAGATCAATGTGAAT
ATTTTCCAAGAAAATCATCCNAGAGGAATACCCAGGGAATGATGGAAAGCATTCCAAGGA
CCCCACAGGAAGAACAAGTCTTTGTCTGAGAGCGCTGGGCTGCTCTAAGACCTCATCTTA
GCCATTGTTCAACTCCTTGTTGGAAAAGAATGGTTCCCTGGTCAACTCCTCTTACATTTC
AGTGGCTATGACAGGCTTAATGTCT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               343-540, - strand, RNAz p=0.780351

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               343-540, - strand, RNAz p=0.780351

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               234-685, gnl|bosTau2|chr11 (60690369-60690811)
               

               
               234-685, gnl|Hg17|chr2 (18811164-18811633)
               

               
               234-685, gnl|Mm7|chr12 (10282934-10282490)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               234-685, gnl|bosTau2|chr11 (60690369-60690811)
               

               
               234-685, gnl|Hg17|chr2 (18811164-18811633)
               

               
               234-685, gnl|Mm7|chr12 (10282934-10282490)

	234-685, gnl\|bosTau2\|chr11 (60690369-60690811)
	234-685, gnl\|Hg17\|chr2 (18811164-18811633)
	234-685, gnl\|Mm7\|chr12 (10282934-10282490)