Non-Coding RNA Search

Ova1-OVRM10050H12

Sequence:


               
               TCAGATAGTCTGGCTGAATCAGAGTTCGAATCAGCTGCCTTCAGTCAGGGCTCTAGATCT
GGCATGAGCGGTGGTTCTCGAAGCCTCAGCATGTCGCGAAGAGACTCGGAGAGCACCCGC
CATGACTCGGAGACAGAGGACATGTTGTGGGACGATCTGCTGCACGGCCCCGAGTGCCGG
TCGTCGGTCACCAGCGACAGTGAGGGGGCCCGTGTGAACTCCCTTCACTCGGGGACCAAA
CGCGACCCCNAAGAGGATGTTTTTCAGCAGAACCATTTATTCTGGCTTCAGAACTCAAGC
CCTGCATCTGATCGCGTTAGTGCCATAATCTGGGAAGGGAGTGAATGCAAAAAGATGGAT
ATGTCTGTGCTGGAAATAAGTGGCATCATCATGAGCAGGGTCAATGCATATCAGCAAGGA
GTCGGCTATCAGATGCTGGGGAATGTCGTCACCATCGGATTAGCATTTTTTCCTTTTTTA
CATCGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TCAGATAGTCTGGCTGAATCAGAGTTCGAATCAGCTGCCTTCAGTCAGGGCTCTAGATCT
GGCATGAGCGGTGGTTCTCGAAGCCTCAGCATGTCGCGAAGAGACTCGGAGAGCACCCGC
CATGACTCGGAGACAGAGGACATGTTGTGGGACGATCTGCTGCACGGCCCCGAGTGCCGG
TCGTCGGTCACCAGCGACAGTGAGGGGGCCCGTGTGAACTCCCTTCACTCGGGGACCAAA
CGCGACCCCNAAGAGGATGTTTTTCAGCAGAACCATTTATTCTGGCTTCAGAACTCAAGC
CCTGCATCTGATCGCGTTAGTGCCATAATCTGGGAAGGGAGTGAATGCAAAAAGATGGAT
ATGTCTGTGCTGGAAATAAGTGGCATCATCATGAGCAGGGTCAATGCATATCAGCAAGGA
GTCGGCTATCAGATGCTGGGGAATGTCGTCACCATCGGATTAGCATTTTTTCCTTTTTTA
CATCGA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               152-270, - strand, RNAz p=0.762149

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               152-270, - strand, RNAz p=0.762149

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               47-270, gnl|bosTau2|chr3 (24576993-24577216)
               

               
               47-270, gnl|Hg17|chr1 (113965141-113964918)
               

               
               47-270, gnl|Mm7|chr3 (103787663-103787886)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-270, gnl|bosTau2|chr3 (24576993-24577216)
               

               
               47-270, gnl|Hg17|chr1 (113965141-113964918)
               

               
               47-270, gnl|Mm7|chr3 (103787663-103787886)

	47-270, gnl\|bosTau2\|chr3 (24576993-24577216)
	47-270, gnl\|Hg17\|chr1 (113965141-113964918)
	47-270, gnl\|Mm7\|chr3 (103787663-103787886)