Non-Coding RNA Search

Ova1-OVRM10052F08

Sequence:


               
               AGTATCGGGTCCGTCTCCCGCCGCGGACGCTCTGCGGAAGAGGGAGAGAAGATGGTGGTC
CTCCGCAGCAGCCTGGAGCTGCACAGCCACCCCGCCGCCTCGGCCACGGACTCCTTGGAC
CTGTCCAACGAGTTCCTCAGTCTGGAGCAGATCGGCCGGAGGCGGCTCCGCTCGGCCGGC
GCCGCTGAGCAGTCCGCGGTCACCGCGGCCGCCGCGGGCGATGGGTCTTCAGTTAAGGAA
GTTGAAACTTATCAGCGGACACGTGCTTTAAGGTCTTTGAGAAAAAATGCACAGAATTCT
TCAGATTCTAGTTTCGATAAGAATATGGAAATAACGGAGAAGCATGCTAATGGCAGGCAT
TTTACAAGGCAGTTGGCCAGACAGCAGGCTGATAAAAAAAAAAAAAAAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTATCGGGTCCGTCTCCCGCCGCGGACGCTCTGCGGAAGAGGGAGAGAAGATGGTGGTC
CTCCGCAGCAGCCTGGAGCTGCACAGCCACCCCGCCGCCTCGGCCACGGACTCCTTGGAC
CTGTCCAACGAGTTCCTCAGTCTGGAGCAGATCGGCCGGAGGCGGCTCCGCTCGGCCGGC
GCCGCTGAGCAGTCCGCGGTCACCGCGGCCGCCGCGGGCGATGGGTCTTCAGTTAAGGAA
GTTGAAACTTATCAGCGGACACGTGCTTTAAGGTCTTTGAGAAAAAATGCACAGAATTCT
TCAGATTCTAGTTTCGATAAGAATATGGAAATAACGGAGAAGCATGCTAATGGCAGGCAT
TTTACAAGGCAGTTGGCCAGACAGCAGGCTGATAAAAAAAAAAAAAAAAA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|12848598|dbj|BAB28014.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|12848598|dbj|BAB28014.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               80-193, - strand, RNAz p=0.601432

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               80-193, - strand, RNAz p=0.601432

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               5-220, gnl|bosTau2|chr14 (7780134-7780349)
               

               
               5-220, gnl|Hg17|chr8 (124477825-124477607)
               

               
               5-220, gnl|Mm7|chr15 (58200362-58200142)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               5-220, gnl|bosTau2|chr14 (7780134-7780349)
               

               
               5-220, gnl|Hg17|chr8 (124477825-124477607)
               

               
               5-220, gnl|Mm7|chr15 (58200362-58200142)

	5-220, gnl\|bosTau2\|chr14 (7780134-7780349)
	5-220, gnl\|Hg17\|chr8 (124477825-124477607)
	5-220, gnl\|Mm7\|chr15 (58200362-58200142)