Non-Coding RNA Search

Ova1-OVRM10054H08

Sequence:


               
               AACCCTCAAGATACAATAAAATCACCCATGAATGAAGCAAGACTTAAATTTACATATTTC
AAAAGGAGGAAAAAAACTACTTTTGATGGAATCTCTATGTTTGAAATAACTTTTAAATAT
ACACAACTATTTAGTGTCTGGGGTTTCATATTTTGCATAATAAAACATCACAAACCAATG
AAAAAAAAACAAACTGAAAAGTCCCTTTATTTCACTTACATTTCCCTGTGGAAGTTTCTA
CCTAAAAACCAAAGGCTCCTCTCTGGTCTTCTACTCCCTGCTGCTTTGTGGGAGTTTTGT
AAAAGGAAACAGTGTTTGGTAGATTCTGACTGCAAACTTCCTCTGTTCTCAGTCCTGAAA
TGGAAAAGATGTGACTCCAGTCTTGAGTTTGCTTTCCAGGGTGTCAGAAATGAACAGATT
CATCTGGCCCGTAGGGAACACAATTAAAAACAACGATGGCGTCAACTTAAAATACAGCCA
TAAAGAAAAACACAACACGCAAGAACCTTTGGAAAGTCTCTTCTGAAAGCGCTTAANAGG
CTATAAAAGCAGTGTTTGAGGAACATTCATTGAATCTATAACCTGTCAATGTGGTTTAAA
AAAGGAATTGTTTTGGCTTAGCTCATGACCATTATGCTTTTATGAGGACATTCTCCGTGA
ACTTGTANGAAGGCCAACTTTCAAGCCACCAACAAA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AACCCTCAAGATACAATAAAATCACCCATGAATGAAGCAAGACTTAAATTTACATATTTC
AAAAGGAGGAAAAAAACTACTTTTGATGGAATCTCTATGTTTGAAATAACTTTTAAATAT
ACACAACTATTTAGTGTCTGGGGTTTCATATTTTGCATAATAAAACATCACAAACCAATG
AAAAAAAAACAAACTGAAAAGTCCCTTTATTTCACTTACATTTCCCTGTGGAAGTTTCTA
CCTAAAAACCAAAGGCTCCTCTCTGGTCTTCTACTCCCTGCTGCTTTGTGGGAGTTTTGT
AAAAGGAAACAGTGTTTGGTAGATTCTGACTGCAAACTTCCTCTGTTCTCAGTCCTGAAA
TGGAAAAGATGTGACTCCAGTCTTGAGTTTGCTTTCCAGGGTGTCAGAAATGAACAGATT
CATCTGGCCCGTAGGGAACACAATTAAAAACAACGATGGCGTCAACTTAAAATACAGCCA
TAAAGAAAAACACAACACGCAAGAACCTTTGGAAAGTCTCTTCTGAAAGCGCTTAANAGG
CTATAAAAGCAGTGTTTGAGGAACATTCATTGAATCTATAACCTGTCAATGTGGTTTAAA
AAAGGAATTGTTTTGGCTTAGCTCATGACCATTATGCTTTTATGAGGACATTCTCCGTGA
ACTTGTANGAAGGCCAACTTTCAAGCCACCAACAAA

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               230-334, - strand, RNAz p=0.788237

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               230-334, - strand, RNAz p=0.788237

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               152-638, gnl|bosTau2|chr4 (19248191-19247698)
               

               
               152-638, gnl|Hg17|chr7 (107366033-107365506)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               152-638, gnl|bosTau2|chr4 (19248191-19247698)
               

               
               152-638, gnl|Hg17|chr7 (107366033-107365506)

	152-638, gnl\|bosTau2\|chr4 (19248191-19247698)
	152-638, gnl\|Hg17\|chr7 (107366033-107365506)