Non-Coding RNA Search

Ova1-OVRM10055H05

Sequence:


               
               AGTCGCAGCGGGGCCATCTTCGGCAGGCCGGCTGGCTCGGCCTGTGCAGCCGGCTCCCGC
GCCCGCGCCCCTCGCCCGGCCCGATGGCGCCGCGGCAGCTGAGCCCCTTGGTGCTGGCGC
TGGGCGGCGCGGCAGCCGTGCTCGGCTCGGTACTCTTCATCCTCTGGAAGACCTACTTCG
GCCGCGGACGGGAGCGGCGTTGGGACGGAGGCGAGGCCTGGTGGGGCGCGGAGCCCGCCC
GCCTTCCGGAGTGGGACGAGTGGGATGTGAGTGCCTGGAGGGGACCTGCGCCTCCGTGCA
TGCAGCCAAGGGGTGTGACCACCACCTTGCGGGTTGGGGGGATTGACGCCGCAGGCCTCG
CGCGGGTGGGCGCTAGAGCGTCCCAGAACCGAGAAACCGACCGGCGTTTGGGGGTAATGT
GTGGCGCTATCTTGAGCCGCCATAAGCCTTTGAGCTTTCTCGCTGGCGCCGGAGCGCGAG
GGCGCGGCCCCGGAGCGCTGTCGAGCCCGCGCCCGGTCCAGCGCGCGCCTGCTCGGCGCC
TGCGCAGTGCGCAAGACTCGGGGGATGTCGGGAAAAGCGACCCCGACCCTTGCCCCCGCC
CTCGCTCCCTCCAGCCAGCGTCTCATTTGCTTGTTTCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTCGCAGCGGGGCCATCTTCGGCAGGCCGGCTGGCTCGGCCTGTGCAGCCGGCTCCCGC
GCCCGCGCCCCTCGCCCGGCCCGATGGCGCCGCGGCAGCTGAGCCCCTTGGTGCTGGCGC
TGGGCGGCGCGGCAGCCGTGCTCGGCTCGGTACTCTTCATCCTCTGGAAGACCTACTTCG
GCCGCGGACGGGAGCGGCGTTGGGACGGAGGCGAGGCCTGGTGGGGCGCGGAGCCCGCCC
GCCTTCCGGAGTGGGACGAGTGGGATGTGAGTGCCTGGAGGGGACCTGCGCCTCCGTGCA
TGCAGCCAAGGGGTGTGACCACCACCTTGCGGGTTGGGGGGATTGACGCCGCAGGCCTCG
CGCGGGTGGGCGCTAGAGCGTCCCAGAACCGAGAAACCGACCGGCGTTTGGGGGTAATGT
GTGGCGCTATCTTGAGCCGCCATAAGCCTTTGAGCTTTCTCGCTGGCGCCGGAGCGCGAG
GGCGCGGCCCCGGAGCGCTGTCGAGCCCGCGCCCGGTCCAGCGCGCGCCTGCTCGGCGCC
TGCGCAGTGCGCAAGACTCGGGGGATGTCGGGAAAAGCGACCCCGACCCTTGCCCCCGCC
CTCGCTCCCTCCAGCCAGCGTCTCATTTGCTTGTTTCC

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               200-295, - strand, RNAz p=0.730818

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               200-295, - strand, RNAz p=0.730818

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               1-551, gnl|bosTau2|chr7 (25968648-25969196)
               

               
               1-551, gnl|Hg17|chr5 (175725096-175725703)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-551, gnl|bosTau2|chr7 (25968648-25969196)
               

               
               1-551, gnl|Hg17|chr5 (175725096-175725703)

	1-551, gnl\|bosTau2\|chr7 (25968648-25969196)
	1-551, gnl\|Hg17\|chr5 (175725096-175725703)