Non-Coding RNA Search

Ova1-OVRM10058G08

Sequence:


               
               AGTTTACACTTAAATCTTGGAATCTTGGAGTTTCTGGAAGGAGAACTCTTTTCCTGATAT
AGTATTTGGGATTTATTTAGCGCTTTTTATTTATGTAGCTGTTTTAGGTGCAGGAAATAC
ATCCTTTGCTGCATTTTCTGTGTAGGTTGTCCCTTTACCTCCAAAAGATACTTACTCTCC
AACTGTTTTAAAATATGGAATTGTGGTCCAAAGTTTATCAGTTGGACCTTCTTGCCCCTT
CCAGCCTTAAGATGCCAACACAGAATATTCTTTCAAAGAGTGAACCATGGGACATCTAGG
CAACAGCGTGATATCATGGGAATAAGTAGTATAGTATAGGCATGGAAAACTTTGGAGCTC
AATCCCTTAACTGCAGATTTGCATTGTGCCTTGAGACAGTTATGGGATGTTGGGCAAATT
GTATAAGTTTCTCTTCTCTGGGAAAATCTGCCTCAGTTTCTTTCCCTGGGAAAGATATTT
CCTACCTCACTGGTAGTTTCATAGCTTGAGTGAGATAAAGTGTGTGGAAGTACTTTGTAA
GCTGTAAAGATGGTACTTAACATTTCAGTCTTGATCTTTTCCCGATTGGAAAAGCTTTTT
TATCTACCTTAGAATAGGTTCATATTATAGTCATATGGAAATAGAGCTCNAAACTGAAGC
AAGTATTGCTCTGGGCTTGGAGACGATGCTTTCAGGACTACATGTCCC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGTTTACACTTAAATCTTGGAATCTTGGAGTTTCTGGAAGGAGAACTCTTTTCCTGATAT
AGTATTTGGGATTTATTTAGCGCTTTTTATTTATGTAGCTGTTTTAGGTGCAGGAAATAC
ATCCTTTGCTGCATTTTCTGTGTAGGTTGTCCCTTTACCTCCAAAAGATACTTACTCTCC
AACTGTTTTAAAATATGGAATTGTGGTCCAAAGTTTATCAGTTGGACCTTCTTGCCCCTT
CCAGCCTTAAGATGCCAACACAGAATATTCTTTCAAAGAGTGAACCATGGGACATCTAGG
CAACAGCGTGATATCATGGGAATAAGTAGTATAGTATAGGCATGGAAAACTTTGGAGCTC
AATCCCTTAACTGCAGATTTGCATTGTGCCTTGAGACAGTTATGGGATGTTGGGCAAATT
GTATAAGTTTCTCTTCTCTGGGAAAATCTGCCTCAGTTTCTTTCCCTGGGAAAGATATTT
CCTACCTCACTGGTAGTTTCATAGCTTGAGTGAGATAAAGTGTGTGGAAGTACTTTGTAA
GCTGTAAAGATGGTACTTAACATTTCAGTCTTGATCTTTTCCCGATTGGAAAAGCTTTTT
TATCTACCTTAGAATAGGTTCATATTATAGTCATATGGAAATAGAGCTCNAAACTGAAGC
AAGTATTGCTCTGGGCTTGGAGACGATGCTTTCAGGACTACATGTCCC

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               340-539, + strand, RNAz p=0.976706

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               340-539, + strand, RNAz p=0.976706

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               4-699, gnl|bosTau2|chr22 (40625538-40626215)
               

               
               4-699, gnl|Mm7|chr9 (109813283-109812671)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               4-699, gnl|bosTau2|chr22 (40625538-40626215)
               

               
               4-699, gnl|Mm7|chr9 (109813283-109812671)

	4-699, gnl\|bosTau2\|chr22 (40625538-40626215)
	4-699, gnl\|Mm7\|chr9 (109813283-109812671)