Ova1-OVRM10060A03
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TTTTAGAAAGAGAAATGATTGCCACCAGGTACACTCATTTTCTGCTATGTGTAATTCTGA
CACTCTAAGTTTGGAATATGTCCTGTACAGAATTCTGTAGTTAGATGTTTTTAATCTTAG
CCAACTTAATTTTATTAATGTTTTATGTTTTGAAAGATTTAAAAGAAGTAAGAATAATTT
GGGCAGGATTGTAAACTTGTCAGCCACATTCCTCACATCTTGTTCTTCAGAGCACAGCAA
GGAAATAGAAGAATTGAAGTGTCGTAGACGTCTCGTTGCACATATTGCAATAAACAGCTA
TAGAATTATATCACGAAATCAGCTATCCTCATGTGCAATGTGATCAGTTTGTTACTATGG
TAACATTTCCATTTGTGAATTTTTGTAGAGTTAAAATTTGTAGTCATCCTATCATAGCAC
CATTGGCTTTTGATTTTTCATGTAAATAAATCACTGTGCTACCTGCGTGCTATTAAGTGG
CATCAGCCGCAGCACTTAATTACCACCCCTTATACTCTAGGCTAAGGAATCAAAAATAGG
AAGATGGAAGAAATGAGAACATTTTACAAAATTACATTTTAAGACTGTCCTGATGTTGCT
GGTAAAATTTTAAGTATTTCTTANGAGGATTAAGAACATTGCCAGCTACTCTCTGAGACG
CTTTAATTTTATAAGTACATGATATGAAACTGGTTAGGCGTGCTAGCAGT
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Blue-coloured subsequences are predicted RNA structures by RNAz
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TTTTAGAAAGAGAAATGATTGCCACCAGGTACACTCATTTTCTGCTATGTGTAATTCTGA
CACTCTAAGTTTGGAATATGTCCTGTACAGAATTCTGTAGTTAGATGTTTTTAATCTTAG
CCAACTTAATTTTATTAATGTTTTATGTTTTGAAAGATTTAAAAGAAGTAAGAATAATTT
GGGCAGGATTGTAAACTTGTCAGCCACATTCCTCACATCTTGTTCTTCAGAGCACAGCAA
GGAAATAGAAGAATTGAAGTGTCGTAGACGTCTCGTTGCACATATTGCAATAAACAGCTA
TAGAATTATATCACGAAATCAGCTATCCTCATGTGCAATGTGATCAGTTTGTTACTATGG
TAACATTTCCATTTGTGAATTTTTGTAGAGTTAAAATTTGTAGTCATCCTATCATAGCAC
CATTGGCTTTTGATTTTTCATGTAAATAAATCACTGTGCTACCTGCGTGCTATTAAGTGG
CATCAGCCGCAGCACTTAATTACCACCCCTTATACTCTAGGCTAAGGAATCAAAAATAGG
AAGATGGAAGAAATGAGAACATTTTACAAAATTACATTTTAAGACTGTCCTGATGTTGCT
GGTAAAATTTTAAGTATTTCTTANGAGGATTAAGAACATTGCCAGCTACTCTCTGAGACG
CTTTAATTTTATAAGTACATGATATGAAACTGGTTAGGCGTGCTAGCAGT
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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1-435, gnl|bosTau2|chr1 (101086651-101086219) |
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1-435, gnl|Hg17|chr3 (17564530-17564159) |
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1-435, gnl|Mm7|chr17 (49194717-49194266) |
| |
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480-710, gnl|bosTau2|chr1 (101086209-101085979) |
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480-710, gnl|canFam2|chr23 (28440356-28440154) |
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480-710, gnl|dasNov1|scaffold_18358 (40942-41149) |
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480-710, gnl|echTel1|scaffold_315134 (1557-1336) |
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480-710, gnl|hg17|chr3 (17563884-17564106) |
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480-710, gnl|Hg17|chr3 (17564129-17563883) |
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480-710, gnl|loxAfr1|scaffold_20463 (14518-14740) |
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480-710, gnl|mm7|chr17 (49194013-49194233) |
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480-710, gnl|Mm7|chr17 (49194256-49194012) |
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480-710, gnl|monDom2|scaffold_7 (73181373-73181618) |
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480-710, gnl|oryCun1|scaffold_209454 (182747-182532) |
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480-710, gnl|panTro1|chr2 (18257195-18257417) |
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480-710, gnl|rheMac2|chr2 (159849863-159850085) |
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480-710, gnl|rn3|chr9 (4287808-4287588) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-435, gnl|bosTau2|chr1 (101086651-101086219) |
|
1-435, gnl|Hg17|chr3 (17564530-17564159) |
|
1-435, gnl|Mm7|chr17 (49194717-49194266) |
| |
|
480-710, gnl|bosTau2|chr1 (101086209-101085979) |
|
480-710, gnl|canFam2|chr23 (28440356-28440154) |
|
480-710, gnl|dasNov1|scaffold_18358 (40942-41149) |
|
480-710, gnl|echTel1|scaffold_315134 (1557-1336) |
|
480-710, gnl|hg17|chr3 (17563884-17564106) |
|
480-710, gnl|Hg17|chr3 (17564129-17563883) |
|
480-710, gnl|loxAfr1|scaffold_20463 (14518-14740) |
|
480-710, gnl|mm7|chr17 (49194013-49194233) |
|
480-710, gnl|Mm7|chr17 (49194256-49194012) |
|
480-710, gnl|monDom2|scaffold_7 (73181373-73181618) |
|
480-710, gnl|oryCun1|scaffold_209454 (182747-182532) |
|
480-710, gnl|panTro1|chr2 (18257195-18257417) |
|
480-710, gnl|rheMac2|chr2 (159849863-159850085) |
|
480-710, gnl|rn3|chr9 (4287808-4287588) |
