Non-Coding RNA Search

Ova1-OVRM10061F10

Sequence:


               
               TTTAAAAGATTGTGTTACAAAGATGTTTAGGTACCAGTCCATAATCCACGTTCTTTGTTC
TCAGTCTTGGGTGCTCAGCATGAACATTAAATGTTGTTGTTCAGCAGTTCCCACTGTGGC
ACTATGGGATGGGCAGCAtcgatctccagcctggcacagtgggttaaaggatctggagtt
gccagctgtgggttaggttgcaactgtggctggaatctgatccctggcctgggatctcca
tatgccTGTGGGTGGCTACNAGGTGGAGGGGGCGATGTTGTTTAATAGTATCTCTGTATT
AGATGGAGCTGTTTGAAGAGATCCAGTCACATGTGGGTTCTTATTTTTAAAAAAGCAGGT
TAGATTCAGCTACTTGTTCCTTGAAATTAGAAATTAGCTGCTGAGGCAGTATAACAAAGA
TTTAGAAAGATAAGAGGCTACTGGTGGCTTGGAGATATTTGGAAAATTAGAATCTATTTT
CTAGAGTCTAAGGGCCAAATATAAGTCCAATCTGAACAATTCTGTAAAACAAATTGGAAA
CTGTggagttcccgtcgtggcgcagtggttaacgaatccgactaggaaccgtgaggttgt
gggttcggtccctgcccttgctcagtgggttgacgatccggcgttgctgtgagctgtggt
gtaggttgcagacgcggctcggatcccgcgttcctgtggctctggcgtaggccggtggct
acagct

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTAAAAGATTGTGTTACAAAGATGTTTAGGTACCAGTCCATAATCCACGTTCTTTGTTC
TCAGTCTTGGGTGCTCAGCATGAACATTAAATGTTGTTGTTCAGCAGTTCCCACTGTGGC
ACTATGGGATGGGCAGCAtcgatctccagcctggcacagtgggttaaaggatctggagtt
gccagctgtgggttaggttgcaactgtggctggaatctgatccctggcctgggatctcca
tatgccTGTGGGTGGCTACNAGGTGGAGGGGGCGATGTTGTTTAATAGTATCTCTGTATT
AGATGGAGCTGTTTGAAGAGATCCAGTCACATGTGGGTTCTTATTTTTAAAAAAGCAGGT
TAGATTCAGCTACTTGTTCCTTGAAATTAGAAATTAGCTGCTGAGGCAGTATAACAAAGA
TTTAGAAAGATAAGAGGCTACTGGTGGCTTGGAGATATTTGGAAAATTAGAATCTATTTT
CTAGAGTCTAAGGGCCAAATATAAGTCCAATCTGAACAATTCTGTAAAACAAATTGGAAA
CTGTggagttcccgtcgtggcgcagtggttaacgaatccgactaggaaccgtgaggttgt
gggttcggtccctgcccttgctcagtgggttgacgatccggcgttgctgtgagctgtggt
gtaggttgcagacgcggctcggatcccgcgttcctgtggctctggcgtaggccggtggct
acagct

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               381-499, + strand, RNAz p=0.776038

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               381-499, + strand, RNAz p=0.776038

Aligned organism(s): 2 entry(ies)

More info

Aligned organism(s): 2 entry(ies)

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               297-499, gnl|bosTau2|chr7 (30594707-30594506)
               

               
               297-499, gnl|Hg17|chr5 (139890161-139890483)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               297-499, gnl|bosTau2|chr7 (30594707-30594506)
               

               
               297-499, gnl|Hg17|chr5 (139890161-139890483)

	297-499, gnl\|bosTau2\|chr7 (30594707-30594506)
	297-499, gnl\|Hg17\|chr5 (139890161-139890483)