Non-Coding RNA Search

Ova1-OVRM10075D02

Sequence:


               
               TGTTTCCTGCGGATACCATGACGGTCACGGTGGTGTATGATAACTCCGAGGCCACCGAGC
TCTGTGCGGCTCAGCACCTCTACCTCAAGCCCATAGCAAAGCTGATGATCAGCGTCCTGC
TCCCGGAGAGCACGGAACCCGTGAGGCCCTTCTCCAACTGGGAGGTCCTTGACCAGCTGA
AGAGCCTGATTTGCCCCGACCAGTTCACCACCGTCCGGCTCTCCAAGAGCACCAAGGACT
TCATCCGCTTTGAGGGGGAGGCCGAAACGCGAAGTTTGGTTCAGATCCTGAAGGCCAAGT
TACACGGGAAGCTCATCAAGCTAAACGGGCTGAAAACAGACCTGAGAGTCGTGGCCACAG
ATGCCCAGGGAGAGTGGGAACACTTCCCCAAGGAAAGGGGGGCCCCGTCGGCTGATGGGC
CCGAGGAGCAGGACCAGGATAAGAGCCCGGATTCCATATACTTTGAAGGCCTACCCTGCA
AGTGGTTTGCACCTAAAGGTTCCAGCGGGGAGAAGCCATGCGAGGAGATCCTTCGGGTGG
TCTTTGAAAGTTTTGGGAAGATCAAGAATGTGGACATTCCGATGC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TGTTTCCTGCGGATACCATGACGGTCACGGTGGTGTATGATAACTCCGAGGCCACCGAGC
TCTGTGCGGCTCAGCACCTCTACCTCAAGCCCATAGCAAAGCTGATGATCAGCGTCCTGC
TCCCGGAGAGCACGGAACCCGTGAGGCCCTTCTCCAACTGGGAGGTCCTTGACCAGCTGA
AGAGCCTGATTTGCCCCGACCAGTTCACCACCGTCCGGCTCTCCAAGAGCACCAAGGACT
TCATCCGCTTTGAGGGGGAGGCCGAAACGCGAAGTTTGGTTCAGATCCTGAAGGCCAAGT
TACACGGGAAGCTCATCAAGCTAAACGGGCTGAAAACAGACCTGAGAGTCGTGGCCACAG
ATGCCCAGGGAGAGTGGGAACACTTCCCCAAGGAAAGGGGGGCCCCGTCGGCTGATGGGC
CCGAGGAGCAGGACCAGGATAAGAGCCCGGATTCCATATACTTTGAAGGCCTACCCTGCA
AGTGGTTTGCACCTAAAGGTTCCAGCGGGGAGAAGCCATGCGAGGAGATCCTTCGGGTGG
TCTTTGAAAGTTTTGGGAAGATCAAGAATGTGGACATTCCGATGC

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26337769|dbj|BAC32570.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26337769|dbj|BAC32570.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               282-438, + strand, RNAz p=0.752234

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               282-438, + strand, RNAz p=0.752234

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               2-585, gnl|bosTau2|chrX (1494122-1493536)
               

               
               2-585, gnl|Hg17|chrX (118173528-118172951)
               

               
               2-585, gnl|Mm7|chrX (31384099-31383516)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               2-585, gnl|bosTau2|chrX (1494122-1493536)
               

               
               2-585, gnl|Hg17|chrX (118173528-118172951)
               

               
               2-585, gnl|Mm7|chrX (31384099-31383516)

	2-585, gnl\|bosTau2\|chrX (1494122-1493536)
	2-585, gnl\|Hg17\|chrX (118173528-118172951)
	2-585, gnl\|Mm7\|chrX (31384099-31383516)